RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 N4BP2L1Q5TBK1 243 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ITPRIPL1Q6GPH6 555 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 LRRC8DQ7L1W4 858 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 MTDHQ86UE4 582 aaKnown RBP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ATPAF2Q8N5M1 289 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ACVR1CQ8NER5 493 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 UTP4Q969X6 686 aaKnown RBP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ZNF778Q96MU6 729 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 HAPLN3Q96S86 360 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 BRD8Q9H0E9 1235 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CRISPLD1Q9H336 500 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ARHGEF3Q9NR81 526 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 FBXO6Q9NRD1 293 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CHRAC1Q9NRG0 131 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 MARCH5Q9NX47 278 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 SIRPGQ9P1W8 387 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ZFATQ9P243 1243 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 TRHDEQ9UKU6 1024 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 E9PAM4 449 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 MTSS1O43312 755 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 MGRN1O60291 552 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 MAFKO60675 156 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TADA2AO75478 443 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 DCTN3O75935 186 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 VNN2O95498 520 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TBX18O95935 607 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 HLA-DQB2P05538 268 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 BPGMP07738 259 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 DLDP09622 509 aaKnown RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 PAX3P23760 479 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TUBP50607 506 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ZNF135P52742 658 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 PGGT1BP53609 377 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TMPRSS15P98073 1019 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 HSF5Q4G112 596 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CTXN3Q4LDR2 81 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 RSPO2Q6UXX9 243 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TMEM135Q86UB9 458 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CCNJLQ8IV13 435 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CDKL2Q92772 493 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ATP2A3Q93084 1043 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 E2F7Q96AV8 911 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TSGA13Q96PP4 275 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TRIM62Q9BVG3 475 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TRIM55Q9BYV6 548 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 NOL6Q9H6R4 1146 aaKnown RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 LRRC40Q9H9A6 602 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CAB39LQ9H9S4 337 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ZNF358Q9NW07 568 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 MARCOQ9UEW3 520 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ZFP69BQ9UJL9 534 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 SCML2Q9UQR0 700 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 STK38LQ9Y2H1 464 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 SLC27A5Q9Y2P5 690 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ARHGEF37A1IGU5 675 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 NT5C1B-RDH14C9J2C7 533 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 KLF11O14901 512 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 LYPLA1O75608 230 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ATP6V1G2O95670 118 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CNTFP26441 200 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CYP2C18P33260 490 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 GP5P40197 560 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 SLC11A1P49279 550 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 NUMBP49757 651 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ARFIP2P53365 341 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 OCRLQ01968 901 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 DLG2Q15700 870 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CTC1Q2NKJ3 1217 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TEDDM1Q5T9Z0 273 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 AFMIDQ63HM1 303 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ATG14Q6ZNE5 492 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TFAP2DQ7Z6R9 452 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 STRA8Q7Z7C7 330 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TTC7BQ86TV6 843 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 TMEM173Q86WV6 379 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 NUDCD3Q8IVD9 361 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ZNF683Q8IZ20 524 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 DCP1BQ8IZD4 617 aaKnown RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 NUP93Q8N1F7 819 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 DCLK2Q8N568 766 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 DBF4BQ8NFT6 615 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 APBB2Q92870 758 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 CASD1Q96PB1 797 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 NAT9Q9BTE0 207 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 FICDQ9BVA6 458 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 IARS2Q9NSE4 1012 aaKnown RBP10.33□□□□□ -0.76
TMEM260-211ENST00000556648 BFARQ9NZS9 450 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 HEY2Q9UBP5 337 aa10.33□□□□□ -0.76
TMEM260-211ENST00000556648 ARVCFO00192 962 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ENPP3O14638 875 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ITM2AO43736 263 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 CACNG3O60359 315 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 USP1O94782 785 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms