RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MMEP08473 750 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 ZNF883P0CG24 379 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 GOT1P17174 413 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 TFE3P19532 575 aaPredicted RBP10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 CCT8P50990 548 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 IRAK1P51617 712 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 PLK1P53350 603 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 RACK1P63244 317 aaKnown RBP10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 ARID5BQ14865 1188 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 DLG2Q15700 870 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 SLC45A4Q5BKX6 768 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 CT47A1Q5JQC4 288 aaPredicted RBP10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 FAM46CQ5VWP2 391 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 NAA35Q5VZE5 725 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 CXorf57Q6NSI4 855 aaKnown RBP10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 SASS6Q6UVJ0 657 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 C14orf80Q86SX3 495 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 NOP9Q86U38 636 aaKnown RBP10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 XYLT1Q86Y38 959 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 AADATQ8N5Z0 425 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 C1orf216Q8TAB5 229 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 CFAP57Q96MR6 1250 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 SLC6A18Q96N87 628 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 GBP4Q96PP9 640 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 SPAG5Q96R06 1193 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 NPY6RQ99463 290 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 FEM1AQ9BSK4 669 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 STK33Q9BYT3 514 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 OSGEPQ9NPF4 335 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 MSRB2Q9Y3D2 182 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 SNX10Q9Y5X0 201 aa10.87□□□□□ -0.67
SPTLC2-205ENST00000556607 PCNX2A6NKB5 2137 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 F8VZ95 297 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 H0Y8X5 98 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 GOLGA6L22H0YM25 854 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 CDK11BP21127 795 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 CD38P28907 300 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 OR1E1P30953 314 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 MAT2AP31153 395 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 GABRB2P47870 512 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ADPRHP54922 357 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 POLR2FP61218 127 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ATP11AP98196 1134 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 CDO1Q16878 200 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 SLC25A52Q3SY17 297 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ALFQ53S48 1182 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 PRAMEF14Q5SWL7 426 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 Q6ZVU0 165 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 TFAP2DQ7Z6R9 452 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 PHLDB2Q86SQ0 1253 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ANKRD20A12PQ8NF67 263 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 OR52K2Q8NGK3 314 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ENOX1Q8TC92 643 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ZCCHC14Q8WYQ9 949 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 SERAC1Q96JX3 654 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 CCDC114Q96M63 670 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 CDC6Q99741 560 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 METTL5Q9NRN9 209 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 TMPRSS4Q9NRS4 437 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 FAM207AQ9NSI2 230 aaPredicted RBP10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 LMBRD1Q9NUN5 540 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ARHGEF38Q9NXL2 777 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 MPP6Q9NZW5 540 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 ADAMTS1Q9UHI8 967 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 PCDHGB2Q9Y5G2 931 aa10.86□□□□□ -0.67
SPTLC2-205ENST00000556607 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 E9PAM4 449 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 VILLO15195 856 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 DFNA5O60443 496 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 SNAP91O60641 907 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 RTN2O75298 545 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 ENDOD1O94919 500 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 LSM8O95777 96 aaKnown RBP10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 ITGAVP06756 1048 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 CDH5P33151 784 aaPredicted RBP10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 FLT3P36888 993 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 CXCR3P49682 368 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 KLK7P49862 253 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 METAP1P53582 386 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 KRT31Q15323 416 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 SYCP1Q15431 976 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 INAVAQ3KP66 663 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 C6orf118Q5T5N4 469 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 OTUD1Q5VV17 481 aaPredicted RBP10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 DPY19L2P1Q6NXN4 242 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 LINGO4Q6UY18 593 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 RAB44Q7Z6P3 723 aaPredicted RBP10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 FAM131BQ86XD5 332 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 SH2D3CQ8N5H7 860 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 EMC1Q8N766 993 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 PIP4K2CQ8TBX8 421 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 EPS8L1Q8TE68 723 aa10.85□□□□□ -0.67
SPTLC2-205ENST00000556607 FRS2Q8WU20 508 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms