RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CLMPQ9H6B4 373 aa10.43□□□□□ -0.74
SCFD1-220ENST00000556486 CISHQ9NSE2 258 aa10.43□□□□□ -0.74
SCFD1-220ENST00000556486 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
SCFD1-220ENST00000556486 STOML2Q9UJZ1 356 aa10.43□□□□□ -0.74
SCFD1-220ENST00000556486 COQ4Q9Y3A0 265 aa10.43□□□□□ -0.74
SCFD1-220ENST00000556486 TEX51A0A1B0GUA7 166 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 EREGO14944 169 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 TIMM44O43615 452 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 PCDHGA12O60330 932 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 STX10O60499 249 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 LDOC1O95751 146 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-220ENST00000556486 SEMA4FO95754 770 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 CD58P19256 250 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 ABCB4P21439 1286 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 GRIA4P48058 902 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 MXI1P50539 228 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 COBLL1Q53SF7 1204 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 KRBA2Q6ZNG9 492 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 BHLHA9Q7RTU4 235 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 ANKS1BQ7Z6G8 1248 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 PIGZQ86VD9 579 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 ZC3H3Q8IXZ2 948 aaKnown RBP10.42□□□□□ -0.74
SCFD1-220ENST00000556486 SCML4Q8N228 414 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 ENGASEQ8NFI3 743 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 SEMA4DQ92854 862 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 PLD4Q96BZ4 506 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 SLC6A18Q96N87 628 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 LGMNQ99538 433 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 SPON2Q9BUD6 331 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 RSRP1Q9BUV0 290 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 SCAND2PQ9GZW5 306 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-220ENST00000556486 MTG2Q9H4K7 406 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 RAB20Q9NX57 234 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 ELOVL2Q9NXB9 296 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 MARCH2Q9P0N8 246 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 AGO1Q9UL18 857 aaKnown RBP10.42□□□□□ -0.74
SCFD1-220ENST00000556486 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
SCFD1-220ENST00000556486 LATS1O95835 1130 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 ZBED1O96006 694 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 WNT1P04628 370 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 ITGAVP06756 1048 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 GSTT1P30711 240 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 CORO1AP31146 461 aaKnown RBP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 ACADVLP49748 655 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 C21orf59P57076 290 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 SLC8A3P57103 927 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 YWHAGP61981 247 aaKnown RBP eCLIP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 EFEMP1Q12805 493 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 FNDC3BQ53EP0 1204 aaKnown RBP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 KDM7AQ6ZMT4 941 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 ERICH1Q86X53 443 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 LURAP1LQ8IV03 231 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 MEIOBQ8N635 442 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 UCMAQ8WVF2 138 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 FGF11Q92914 225 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 SEC16BQ96JE7 1060 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 HEXIM2Q96MH2 286 aaKnown RBP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 INSM2Q96T92 566 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 TRIM4Q9C037 500 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 OLA1Q9NTK5 396 aaKnown RBP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 RASAL2Q9UJF2 1139 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 STRIP2Q9ULQ0 834 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 HBS1LQ9Y450 684 aaKnown RBP10.41□□□□□ -0.74
SCFD1-220ENST00000556486 PIEZO2Q9H5I5 2752 aa10.41□□□□□ -0.74
SCFD1-220ENST00000556486 KNTC1P50748 2209 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 A0A1B0GTQ1 180 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 E9PAM4 449 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 WNT9AO14904 365 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 XPO1O14980 1071 aaKnown RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 CETN3O15182 167 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 PMM2O15305 246 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 SLC16A3O15427 465 aaKnown RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 SLC28A2O43868 658 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 TSPAN3O60637 253 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 CYBBP04839 570 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 CD27P26842 260 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 HOXD9P28356 352 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 TKTL1P51854 596 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 BCAT1P54687 386 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 BNIP3Q12983 259 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 CAMK2GQ13555 558 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 SHBQ15464 509 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 INAVAQ3KP66 663 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 MPP7Q5T2T1 576 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 FBXL19Q6PCT2 694 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 PRICKLE2Q7Z3G6 844 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 KIAA0907Q7Z7F0 614 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 DENND1CQ8IV53 801 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 LSM14AQ8ND56 463 aaKnown RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 OR2T3Q8NH03 318 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 SPATA20Q8TB22 786 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 GANCQ8TET4 914 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 DDI1Q8WTU0 396 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 KCTD13Q8WZ19 329 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 ORAI3Q9BRQ5 295 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 ACE2Q9BYF1 805 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-220ENST00000556486 BTBD1Q9H0C5 482 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 TMEM245Q9H330 911 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 FBRSQ9HAH7 460 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms