RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 TCEAL1Q15170 157 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 TRMT5Q32P41 509 aaKnown RBP15.15■□□□□ 0.02
CUX1-215ENST00000556210 TMEM259Q4ZIN3 620 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 TRNP1Q6NT89 227 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 NPLOC4Q8TAT6 608 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 CMTM5Q96DZ9 223 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 PCED1BQ96HM7 432 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 EXOC2Q96KP1 924 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 PIDD1Q9HB75 910 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 NMRAL1Q9HBL8 299 aa15.15■□□□□ 0.02
CUX1-215ENST00000556210 TBX10O75333 385 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TCEA3O75764 348 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SERPINE1P05121 402 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CHRM1P11229 460 aaPredicted RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 IL1RL1Q01638 556 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SLC25A52Q3SY17 297 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SLC39A12Q504Y0 691 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 PPP1R15BQ5SWA1 713 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CWF19L1Q69YN2 538 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 RIPOR1Q6ZS17 1223 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 UNC93AQ86WB7 457 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SNX32Q86XE0 403 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 NIPA2Q8N8Q9 360 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CDC26Q8NHZ8 85 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TMEM40Q8WWA1 233 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SYT17Q9BSW7 474 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 DUSP16Q9BY84 665 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 PHACTR1Q9C0D0 580 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TCF7L2Q9NQB0 619 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 ACOT9Q9Y305 439 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CDY1Q9Y6F8 540 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TEX264Q9Y6I9 313 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TYROBPO43914 113 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 KLHL2O95198 593 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CCR1P32246 355 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 AFF1P51825 1210 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 SOX4Q06945 474 aaPredicted RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 TBL3Q12788 808 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 CAND1Q86VP6 1230 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 LRRC43Q8N309 656 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 UTP4Q969X6 686 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 ZNF512Q96ME7 567 aaPredicted RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 FAF1Q9UNN5 650 aaPredicted RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 EFR3BQ9Y2G0 817 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SLC27A5Q9Y2P5 690 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 MAST2Q6P0Q8 1798 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 ZBTB42B2RXF5 422 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TK2O00142 265 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SNAI1O95863 264 aaPredicted RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 BPGMP07738 259 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 GLB1LQ6UWU2 654 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 TAS2R42Q7RTR8 314 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 PCDH20Q8N6Y1 951 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 RNF217Q8TC41 542 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SLC35F5Q8WV83 523 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 HSFY1Q96LI6 401 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SERPINI1Q99574 410 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 IGKV6D-21A0A0A0MT36 114 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 FAM72CH0Y354 149 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 C2P06681 752 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 FESP07332 822 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 STMN1P16949 149 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CHRNA4P43681 627 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 SERPINB8P50452 374 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 CDC42EP1Q00587 391 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 FAM72AQ5TYM5 149 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 FAM72DQ6L9T8 149 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 IYDQ6PHW0 289 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 FAM35AQ86V20 835 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 FAM72BQ86X60 149 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 PSTKQ8IV42 348 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 URGCPQ8TCY9 931 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 WDR60Q8WVS4 1066 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 MYLPFQ96A32 169 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 ZNF333Q96JL9 665 aa15.14■□□□□ 0.01
CUX1-215ENST00000556210 AFF4Q9UHB7 1163 aaKnown RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 FARP1Q9Y4F1 1045 aaPredicted RBP15.14■□□□□ 0.01
CUX1-215ENST00000556210 C9JVG2 144 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 TRIM13O60858 407 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 ODC1P11926 461 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 FLOT2Q14254 428 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 SLC26A9Q7LBE3 791 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 KNL1Q8NG31 2342 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 ZNF398Q8TD17 642 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 SLC7A6OSQ96CW6 309 aaPredicted RBP15.13■□□□□ 0.01
CUX1-215ENST00000556210 SNX27Q96L92 541 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 USP29Q9HBJ7 922 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 CCDC167Q9P0B6 97 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 EPS15L1Q9UBC2 864 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 SOX13Q9UN79 622 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 ANKRD12Q6UB98 2062 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 ERI2A8K979 691 aaKnown RBP15.13■□□□□ 0.01
CUX1-215ENST00000556210 TP73O15350 636 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 SOAT2O75908 522 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 GCAP28676 217 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 IRF9Q00978 393 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 NOMO2Q5JPE7 1267 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms