RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 IL12RB2Q99665 862 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 NKX2-4Q9H2Z4 354 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■□□□□ 9.1
HNRNPC-223ENST00000556142 MRPL17Q9NRX2 175 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 TMEM248Q9NWD8 314 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 MPP6Q9NZW5 540 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 SEPT10Q9P0V9 454 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 STK39Q9UEW8 545 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 TRHDEQ9UKU6 1024 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 CHMP2BQ9UQN3 213 aa9.71□□□□□ -0.86
HNRNPC-223ENST00000556142 XIRP2A4UGR9 3374 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 GOLGA6L7A0A1B0GV03 622 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 COCHO43405 550 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 CDH16O75309 829 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 OAS1P00973 400 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 F11P03951 625 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 IVLP07476 585 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 CREB1P16220 341 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ATP5C1P36542 298 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 MDH1P40925 334 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 KCNQ1P51787 676 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 NDST2P52849 883 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 COG7P83436 770 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 TWF1Q12792 350 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 MTA1Q13330 715 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 SKIV2LQ15477 1246 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 IER5LQ5T953 404 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 RAP1GAP2Q684P5 730 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 DNAJB7Q7Z6W7 309 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 MIB1Q86YT6 1006 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 LRRC49Q8IUZ0 686 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 PALM2Q8IXS6 379 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 MPP5Q8N3R9 675 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ARFGAP2Q8N6H7 521 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 FBF1Q8TES7 1133 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ARNTL2Q8WYA1 636 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 HERVK_113Q902F9 699 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 PSMG2Q969U7 264 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 AZIN2Q96A70 460 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ZNF419Q96HQ0 510 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 CCDC77Q9BR77 488 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 MLPHQ9BV36 600 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 KLF16Q9BXK1 252 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 CAPS2Q9BXY5 557 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ZYG11BQ9C0D3 744 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 RNF38Q9H0F5 515 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 GBA3Q9H227 469 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 MTIF3Q9H2K0 278 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ACSS3Q9H6R3 686 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 VPS37BQ9H9H4 285 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 PPCSQ9HAB8 311 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 IL21Q9HBE4 155 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 XAB2Q9HCS7 855 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 ZNF334Q9HCZ1 680 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 SLC24A2Q9UI40 661 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 DNMT3LQ9UJW3 386 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 VANGL2Q9ULK5 521 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 TTLL3Q9Y4R7 772 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 INSL6Q9Y581 213 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 PCDHB12Q9Y5F1 795 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 CHD7Q9P2D1 2997 aa9.7□□□□□ -0.86
HNRNPC-223ENST00000556142 A6NNZ2 444 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 FOXO6A8MYZ6 492 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 MATN3O15232 486 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 ACSL4O60488 711 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 AP2A1O95782 977 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 JCHAINP01591 159 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 HMBSP08397 361 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 GSTA2P09210 222 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 CNPP09543 421 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 TACR2P21452 398 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 SLC6A4P31645 630 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 HPDP32754 393 aaPredicted RBP9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 PHBP35232 272 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 ALDH1A3P47895 512 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 PPP3CCP48454 512 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 LMAN1P49257 510 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 PAPOLAP51003 745 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 CREMQ03060 361 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 TNK2Q07912 1038 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 EFTUD2Q15029 972 aaKnown RBP eCLIP9.69□□□□□ -0.866e-7■■■■□ 23
HNRNPC-223ENST00000556142 SKIDA1Q1XH10 827 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 TUBB8Q3ZCM7 444 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 FAM133BQ5BKY9 247 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 STEAP4Q687X5 459 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 NUGGCQ68CJ6 796 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 ADGRD1Q6QNK2 874 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 CAPN12Q6ZSI9 719 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 CYS1Q717R9 158 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 PRPF39Q86UA1 669 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 ALYREFQ86V81 257 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 HERC6Q8IVU3 1022 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 KLHL23Q8NBE8 558 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 PHOSPHO2Q8TCD6 241 aa9.69□□□□□ -0.86
HNRNPC-223ENST00000556142 MZB1Q8WU39 189 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms