RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 SLC45A4Q5BKX6 768 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 PRAMEF14Q5SWL7 426 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 OLFML1Q6UWY5 402 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.37■□□□□ 0.69
CDKN3-209ENST00000556102 SLC26A9Q7LBE3 791 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 GATAD2AQ86YP4 633 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 IRF2BP1Q8IU81 584 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 C1orf131Q8NDD1 294 aaKnown RBP19.37■□□□□ 0.69
CDKN3-209ENST00000556102 OR8D1Q8WZ84 308 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 ALG14Q96F25 216 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 KDM4CQ9H3R0 1056 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 VANGL2Q9ULK5 521 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 LAMA5O15230 3695 aa19.37■□□□□ 0.69
CDKN3-209ENST00000556102 URB1O60287 2271 aaKnown RBP19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3DA0A087WVF3 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3IA0A087WXS9 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3EA0A087X179 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3KA0A087X1G2 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3FA6NER0 549 aaPredicted RBP19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3LB9A6J9 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 SLC7A4O43246 635 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 LATO43561 262 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 ATP9BO43861 1147 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 ERBB2P04626 1255 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 ITGAVP06756 1048 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3HP0C7X1 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 NOS2P35228 1153 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 MTIF2P46199 727 aaKnown RBP19.36■□□□□ 0.69
CDKN3-209ENST00000556102 PPP2CBP62714 309 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 PPP2CAP67775 309 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 NME3Q13232 169 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 SHBQ15464 509 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 SMAD1Q15797 465 aaKnown RBP19.36■□□□□ 0.69
CDKN3-209ENST00000556102 PTPN20Q4JDL3 420 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 CCDC157Q569K6 752 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 FAM46CQ5VWP2 391 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3GQ6DHY5 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3CQ6IPX1 549 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 NAPEPLDQ6IQ20 393 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D3Q8IZP1 549 aaPredicted RBP19.36■□□□□ 0.69
CDKN3-209ENST00000556102 OR52K2Q8NGK3 314 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 SAP25Q8TEE9 199 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 FEM1AQ9BSK4 669 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 SIX2Q9NPC8 291 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 HS3ST4Q9Y661 456 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 NBEAQ8NFP9 2946 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 ITPR1Q14643 2758 aa19.36■□□□□ 0.69
CDKN3-209ENST00000556102 ARID1BQ8NFD5 2236 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 PLK4O00444 970 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 ALOX15BO15296 676 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 CLDN11O75508 207 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 HOXB3P14651 431 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 KRT9P35527 623 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 NUDT1P36639 197 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 ARRB1P49407 418 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 IRAK1P51617 712 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 METAP1P53582 386 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 NXPH1P58417 271 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 SLC6A3Q01959 620 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 ZNF177Q13360 481 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 CAMK2BQ13554 666 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 CAMK4Q16566 473 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 C5orf22Q49AR2 442 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 ACCSLQ4AC99 568 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 DHRS13Q6UX07 377 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 PRPF39Q86UA1 669 aaKnown RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 MARCH9Q86YJ5 346 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 OXR1Q8N573 874 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 ZNF397Q8NF99 534 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 SYNCQ9H7C4 482 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 RRN3Q9NYV6 651 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 VPS28Q9UK41 221 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 DNAJC12Q9UKB3 198 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 AJAP1Q9UKB5 411 aaPredicted RBP19.35■□□□□ 0.69
CDKN3-209ENST00000556102 SARDHQ9UL12 918 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 PCDHGA1Q9Y5H4 931 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 OR51B4Q9Y5P0 310 aa19.35■□□□□ 0.69
CDKN3-209ENST00000556102 TRABD2BA6NFA1 517 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 C1QTNF3-AMACRE9PGA6 284 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 M0QYT0 321 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 TLR4O00206 839 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 ENC1O14682 589 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 PLRG1O43660 514 aaKnown RBP19.34■□□□□ 0.69
CDKN3-209ENST00000556102 RTN2O75298 545 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 PAGE1O75459 146 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 EPHA8P29322 1005 aaPredicted RBP19.34■□□□□ 0.69
CDKN3-209ENST00000556102 CLCN1P35523 988 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 GGCXP38435 758 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 CDH4P55283 916 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 UBE2HP62256 183 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 DLG2Q15700 870 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 C19orf48Q6RUI8 117 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 SLC47A2Q86VL8 602 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 ZDHHC17Q8IUH5 632 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 SH2D3CQ8N5H7 860 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 MFSD2AQ8NA29 543 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 CNDP2Q96KP4 475 aaKnown RBP19.34■□□□□ 0.69
CDKN3-209ENST00000556102 ERVMER34-1Q9H9K5 563 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 ARHGAP20Q9P2F6 1191 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms