RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 PAPSS1O43252 624 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 RNASEH1O60930 286 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SIN3BO75182 1162 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 GRAP2O75791 330 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 FSBPO95073 299 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 LUC7L3O95232 432 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 MOCS3O95396 460 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SEMA4FO95754 770 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 TRUB2O95900 331 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 IGLV3-19P01714 112 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 MATKP42679 507 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 MTIF2P46199 727 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 CSNK1EP49674 416 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 UBE2HP62256 183 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 YWHAZP63104 245 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 PITX1P78337 314 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SLC14A1Q13336 389 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 PDCLQ13371 301 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 TAF5Q15542 800 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 EXOC3L4Q17RC7 722 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 FSCBQ5H9T9 825 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 MS4A13Q5J8X5 152 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 RNF219Q5W0B1 726 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 RAP1GAP2Q684P5 730 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 ZNF776Q68DI1 518 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 TRIM65Q6PJ69 517 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 GBP6Q6ZN66 633 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 ENOSF1Q7L5Y1 443 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 KIAA0907Q7Z7F0 614 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 NAXDQ8IW45 347 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 DHX40Q8IX18 779 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 CHCHD4Q8N4Q1 142 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 PNPLA1Q8N8W4 532 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SLC39A13Q96H72 371 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 BTN2A3PQ96KV6 586 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 MED15Q96RN5 788 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 ZDHHC5Q9C0B5 715 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 BTBD1Q9H0C5 482 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 THAP9Q9H5L6 903 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 GAREM1Q9H706 876 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SYNCQ9H7C4 482 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 FAM204AQ9H8W3 233 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 FBRSQ9HAH7 460 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 GRPEL1Q9HAV7 217 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 IL21RQ9HBE5 538 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 POPDC2Q9HBU9 364 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 DDIT4Q9NX09 232 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 FBXL12Q9NXK8 326 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SLC12A6Q9UHW9 1150 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 CYTH4Q9UIA0 394 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 XPO7Q9UIA9 1087 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 KLK13Q9UKR3 277 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 INTS6Q9UL03 887 aaKnown RBP6.92□□□□□ -1.3
PSEN1-216ENST00000556066 CNTN6Q9UQ52 1028 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 NCKAP1Q9Y2A7 1128 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 NFE2L3Q9Y4A8 694 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 SLCO1B1Q9Y6L6 691 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 KALRNO60229 2985 aa6.92□□□□□ -1.3
PSEN1-216ENST00000556066 WDFY3Q8IZQ1 3526 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 FAM170AA1A519 330 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 SRRM3A6NNA2 597 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 BECN2A8MW95 431 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TTC34A8MYJ7 566 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 F5H5T6 163 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 GJB3O75712 270 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 CER1O95813 267 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ASLP04424 464 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ABCB4P21439 1286 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TACR2P21452 398 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PON1P27169 355 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 KRT9P35527 623 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 CTSOP43234 321 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 SCTRP47872 440 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 RPL34P49207 117 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 AFF3P51826 1226 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 CDK17Q00537 523 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ECT2LQ008S8 904 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ZBTB16Q05516 673 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 NME3Q13232 169 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 NNTQ13423 1086 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 HNRNPDQ14103 355 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TEAD4Q15561 434 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 HLA-BQ31612 363 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 HNRNPA1L2Q32P51 320 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ZSCAN23Q3MJ62 389 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 HSP90AA4PQ58FG1 418 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PITRM1Q5JRX3 1037 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 OR6B2Q6IFH4 312 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 IL27RAQ6UWB1 636 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 LRSAM1Q6UWE0 723 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 LAYNQ6UX15 382 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TMEM110Q86TL2 294 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 CIR1Q86X95 450 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 MMAAQ8IVH4 418 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 APCDD1Q8J025 514 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms