RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NIPA2Q8N8Q9 360 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 ATP6V0D2Q8N8Y2 350 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 LRRC57Q8N9N7 239 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PGAP3Q96FM1 320 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 NPY6RQ99463 290 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 MKRN2Q9H000 416 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 RRN3Q9NYV6 651 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 USP36Q9P275 1121 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 STAP1Q9ULZ2 295 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 DNAH14Q0VDD8 3507 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 NCOR2Q9Y618 2525 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 SPAG17Q6Q759 2223 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 GRID2IPA4D2P6 1211 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 CTAGE9A4FU28 777 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 F5H5T6 163 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SLC30A4O14863 429 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SPOPO43791 374 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SYNCRIPO60506 623 aaKnown RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 RNF8O76064 485 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 IGLV3-19P01714 112 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 ASLP04424 464 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 ATP5BP06576 529 aaKnown RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 EPHX1P07099 455 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 HOXD12P35452 270 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 FLT3P36888 993 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 DPP6P42658 865 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 PTGER3P43115 390 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 PTPN9P43378 593 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 DHPSP49366 369 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 COPAP53621 1224 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 LIMK1P53667 647 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 LMAN2Q12907 356 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 CCDC6Q16204 474 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 FNDC3BQ53EP0 1204 aaKnown RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 RABGAP1LQ5R372 815 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 PEAR1Q5VY43 1037 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 LYSMD4Q5XG99 296 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 KIAA1324Q6UXG2 1013 aaKnown RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 BNIPLQ7Z465 357 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 CFAP52Q8N1V2 620 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SLC35F6Q8N357 371 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 EMC1Q8N766 993 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 C12orf50Q8NA57 414 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 KDM1BQ8NB78 822 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 JOSD2Q8TAC2 188 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 CYB5D2Q8WUJ1 264 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 RXFP2Q8WXD0 754 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 TTC17Q96AE7 1141 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 ERLEC1Q96DZ1 483 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 TRIM7Q9C029 511 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SLC6A17Q9H1V8 727 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SMOC1Q9H4F8 434 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 FBRSQ9HAH7 460 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 CD93Q9NPY3 652 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 PIGVQ9NUD9 493 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 TMEM51Q9NW97 253 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 STIM2Q9P246 746 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SLC12A6Q9UHW9 1150 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 INTS6Q9UL03 887 aaKnown RBP9.91□□□□□ -0.82
ACTN1-215ENST00000555616 PLA2G4CQ9UP65 541 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 JRKLQ9Y4A0 524 aa9.91□□□□□ -0.82
ACTN1-215ENST00000555616 SYNJ2BP-COX16A0A087WUM0 186 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 A0A1B0GVM2 712 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TCAF2A6NFQ2 919 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 MIF4GDA9UHW6 222 aaKnown RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 M0QYT0 321 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 MAP3K13O43283 966 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 GDF9O60383 454 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 PAGE1O75459 146 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 HLA-EP13747 358 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TNNT1P13805 278 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 POLR2EP19388 210 aaKnown RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TFE3P19532 575 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CASQ1P31415 396 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CSKP41240 450 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 SSR1P43307 286 aaKnown RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CXCR3P49682 368 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 SULT1E1P49888 294 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 RPL6Q02878 288 aaKnown RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 NME3Q13232 169 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 PLEKHG6Q3KR16 790 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 SLC25A52Q3SY17 297 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 AASDHQ4L235 1098 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 FSCBQ5H9T9 825 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 PITRM1Q5JRX3 1037 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 BRMS1LQ5PSV4 323 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TCEAL6Q6IPX3 200 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CXorf57Q6NSI4 855 aaKnown RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TRNP1Q6NT89 227 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 FBXL22Q6P050 247 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 DGLUCYQ7Z3D6 616 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 SLFN11Q7Z7L1 901 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms