RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 MDGA2Q7Z553 956 aa4.21□□□□□ -1.74
SCFD1-216ENST00000555550 CCDC25Q86WR0 208 aa4.21□□□□□ -1.74
SCFD1-216ENST00000555550 RTKNQ9BST9 563 aa4.21□□□□□ -1.74
SCFD1-216ENST00000555550 SPAG4Q9NPE6 437 aa4.21□□□□□ -1.74
SCFD1-216ENST00000555550 SLC25A13Q9UJS0 675 aa4.21□□□□□ -1.74
SCFD1-216ENST00000555550 INSL5Q9Y5Q6 135 aa4.21□□□□□ -1.74
SCFD1-216ENST00000555550 MBD3L5A6NJ08 208 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-216ENST00000555550 NTN3O00634 580 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-216ENST00000555550 MDM4O15151 490 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 SPTLC2O15270 562 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 LINC01565O15544 149 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 NEURL1O76050 574 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ZNF432O94892 652 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 IFNA2P01563 188 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 LCKP06239 509 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ITGA2BP08514 1039 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 PCP4P48539 62 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ADPRHP54922 357 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 DSCR9P59020 149 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 TNFAIP2Q03169 654 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 PTK2BQ14289 1009 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 PFKFB4Q16877 469 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 INO80DQ53TQ3 878 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-216ENST00000555550 WASHC2DQ5SRD0 308 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 SYCP2LQ5T4T6 812 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 KLHL17Q6TDP4 642 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 PARM1Q6UWI2 310 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ANKS1BQ7Z6G8 1248 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 IGFN1Q86VF2 1251 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 CCDC117Q8IWD4 279 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-216ENST00000555550 CCDC146Q8IYE0 955 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ISCUQ9H1K1 167 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ELAC1Q9H777 363 aaKnown RBP4.2□□□□□ -1.74
SCFD1-216ENST00000555550 TXNRD2Q9NNW7 524 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 ARL15Q9NXU5 204 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 LRFN1Q9P244 771 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 TBC1D14Q9P2M4 693 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 PCDHA10Q9Y5I2 948 aa4.2□□□□□ -1.74
SCFD1-216ENST00000555550 A0A087WV62 115 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 KCNJ18B7U540 433 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 PLGP00747 810 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-216ENST00000555550 SETSIPP0DME0 302 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 KLRC2P26717 231 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 HDAC1Q13547 482 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-216ENST00000555550 SLC4A8Q2Y0W8 1093 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 NFRKBQ6P4R8 1299 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 RAB11FIP2Q7L804 512 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 KDELC2Q7Z4H8 507 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 MORC1Q86VD1 984 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 TMEM200AQ86VY9 491 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 GPSM1Q86YR5 675 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 SLC25A41Q8N5S1 370 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 DPP10Q8N608 796 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 EXD3Q8N9H8 876 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 ATG16L2Q8NAA4 619 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 C7orf57Q8NEG2 295 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 RSC1A1Q92681 617 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 INPP5DQ92835 1189 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 KATNAL1Q9BW62 490 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-216ENST00000555550 RMI1Q9H9A7 625 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 MAP6D1Q9H9H5 199 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 PDE11AQ9HCR9 933 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 ZNF304Q9HCX3 659 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 SEPSECSQ9HD40 501 aaKnown RBP4.19□□□□□ -1.74
SCFD1-216ENST00000555550 SIRT3Q9NTG7 399 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-216ENST00000555550 HIF1ANQ9NWT6 349 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 HERC5Q9UII4 1024 aaKnown RBP4.19□□□□□ -1.74
SCFD1-216ENST00000555550 ICAM5Q9UMF0 924 aa4.19□□□□□ -1.74
SCFD1-216ENST00000555550 FAM90A18PA6NE21 464 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM90A16PA6NEW6 464 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM90A9PA6NNJ1 464 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM90A5PA8MXJ8 464 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 ACTL6BO94805 426 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 KLKB1P03952 638 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 CYP1A2P05177 515 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM90A15PP0C7V4 464 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM90A14PP0C7W9 464 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 CPA1P15085 419 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 SLC16A2P36021 539 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 CYP2J2P51589 502 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 OAZ1P54368 228 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 GAS1P54826 345 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 POLE2P56282 527 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 AP2B1P63010 937 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 ICA1Q05084 483 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 PUM3Q15397 648 aaKnown RBP4.18□□□□□ -1.74
SCFD1-216ENST00000555550 TBRG1Q3YBR2 411 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 ZACNQ401N2 412 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 TRIM60Q495X7 471 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 Q5PR19 223 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 ASPHD1Q5U4P2 390 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 SLC30A9Q6PML9 568 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 Q6ZTK2 550 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 RTL10Q7L3V2 364 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 CTU1Q7Z7A3 348 aaKnown RBP4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM217AQ8IXS0 508 aa4.18□□□□□ -1.74
SCFD1-216ENST00000555550 FAM185AQ8N0U4 392 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms