RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 MUC3BQ9H195 1237 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 A0A0D9SEW6 157 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 SLC30A4O14863 429 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 KHNYNO15037 678 aaKnown RBP21.05■□□□□ 0.96
VTI1B-205ENST00000555543 SNAP91O60641 907 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 DNTTP04053 509 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 IRX4P78413 519 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 MAMLD1Q13495 774 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 ARL13BQ3SXY8 428 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 TRIM61Q5EBN2 209 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 SETD3Q86TU7 594 aaPredicted RBP21.05■□□□□ 0.96
VTI1B-205ENST00000555543 VCPIP1Q96JH7 1222 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 FAM129BQ96TA1 746 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 NUP58Q9BVL2 599 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 ZYG11BQ9C0D3 744 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 XPO4Q9C0E2 1151 aaKnown RBP21.05■□□□□ 0.96
VTI1B-205ENST00000555543 PPARGC1AQ9UBK2 798 aaKnown RBP21.05■□□□□ 0.96
VTI1B-205ENST00000555543 OR12D3Q9UGF7 316 aa21.05■□□□□ 0.96
VTI1B-205ENST00000555543 TARSL2A2RTX5 802 aaKnown RBP21.04■□□□□ 0.96
VTI1B-205ENST00000555543 GYPCP04921 128 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 SDHBP21912 280 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 OXTRP30559 389 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 OR1E1P30953 314 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 ACSL1P33121 698 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 LIMK1P53667 647 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 NRG1Q02297 640 aaPredicted RBP21.04■□□□□ 0.96
VTI1B-205ENST00000555543 ZBTB16Q05516 673 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 STPG1Q5TH74 334 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 PLEKHA7Q6IQ23 1121 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 DCUN1D2Q6PH85 259 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 STK40Q8N2I9 435 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 OR7D4Q8NG98 312 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 CPLX3Q8WVH0 158 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 NTAN1Q96AB6 310 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 RTKNQ9BST9 563 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 CNPY3Q9BT09 278 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 OSBPL2Q9H1P3 480 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 PABPC3Q9H361 631 aaKnown RBP21.04■□□□□ 0.96
VTI1B-205ENST00000555543 TSPY26PQ9H489 355 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 FSCN3Q9NQT6 498 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 SERGEFQ9UGK8 458 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 EVLQ9UI08 416 aaPredicted RBP21.04■□□□□ 0.96
VTI1B-205ENST00000555543 VPS51Q9UID3 782 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 SLC25A13Q9UJS0 675 aa21.04■□□□□ 0.96
VTI1B-205ENST00000555543 DCDC2BA2VCK2 349 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 ANKRD62A6NC57 917 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 MID1O15344 667 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 ATP9BO43861 1147 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 LRIG2O94898 1065 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 MT-CO1P00395 513 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 FTLP02792 175 aaPredicted RBP21.03■□□□□ 0.96
VTI1B-205ENST00000555543 GZMAP12544 262 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 GLDCP23378 1020 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 MAOBP27338 520 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 HOXD12P35452 270 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 VASPP50552 380 aaPredicted RBP21.03■□□□□ 0.96
VTI1B-205ENST00000555543 ZBED6P86452 979 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 SCAPQ12770 1279 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 NFKBIBQ15653 356 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 CST6Q15828 149 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 C6orf118Q5T5N4 469 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 PPP1R2P3Q6NXS1 205 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 LRSAM1Q6UWE0 723 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 DGLUCYQ7Z3D6 616 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 MMAAQ8IVH4 418 aaKnown RBP21.03■□□□□ 0.96
VTI1B-205ENST00000555543 DRC7Q8IY82 874 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 PYROXD2Q8N2H3 581 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 SH2D3CQ8N5H7 860 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 DCAF4L2Q8NA75 395 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 CADM4Q8NFZ8 388 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 FOXJ1Q92949 421 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 PPP1R9BQ96SB3 815 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 TRIM7Q9C029 511 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 NDFIP2Q9NV92 336 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 CAPN11Q9UMQ6 739 aa21.03■□□□□ 0.96
VTI1B-205ENST00000555543 ILVBLA1L0T0 632 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 MEI4A8MW99 385 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 K7ERQ8 282 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 CFIP05156 583 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 PLEKP08567 350 aaPredicted RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 NNMTP40261 264 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 DPP6P42658 865 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 PSMD8P48556 350 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 ZNF252P-AS1Q0IIN9 211 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 TTC31Q49AM3 519 aaPredicted RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 TDRD12Q587J7 1177 aaKnown RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 DCAF12L1Q5VU92 463 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 RWDD4Q6NW29 188 aaKnown RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 SLC23A3Q6PIS1 610 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 Q6ZVU0 165 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 NLRP14Q86W24 1093 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 RGL4Q8IZJ4 473 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 SYN2Q92777 582 aaPredicted RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 C2orf49Q9BVC5 232 aaPredicted RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 C6orf106Q9H6K1 298 aaPredicted RBP21.02■□□□□ 0.96
VTI1B-205ENST00000555543 PARVAQ9NVD7 372 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 HS3ST2Q9Y278 367 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 PI4KAP42356 2102 aa21.02■□□□□ 0.96
VTI1B-205ENST00000555543 PCDH15Q96QU1 1955 aa21.01■□□□□ 0.95
VTI1B-205ENST00000555543 SPTBN2O15020 2390 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms