RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NDUFS1P28331 727 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 NR4A2P43354 598 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 SLC37A1P57057 533 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 BAK1Q16611 211 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 SUPT20HL1Q3ZLR7 823 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 NAA35Q5VZE5 725 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 SLC22A25Q6T423 547 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 LAS2Q8IYD9 372 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 C16orf71Q8IYS4 520 aaPredicted RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 ENDOVQ8N8Q3 282 aaKnown RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 RFFLQ8WZ73 363 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 MASTLQ96GX5 879 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 SH2D3AQ9BRG2 576 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 SPRTNQ9H040 489 aaPredicted RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 OSBPL5Q9H0X9 879 aaPredicted RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 TAOK3Q9H2K8 898 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 SFXN1Q9H9B4 322 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 IL21RQ9HBE5 538 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 TLR8Q9NR97 1041 aaKnown RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 SH2D7A6NKC9 451 aaPredicted RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 SYN3O14994 580 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 SPTLC2O15270 562 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 DHX16O60231 1041 aaKnown RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 ALDOCP09972 364 aaKnown RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 CYP2D6P10635 497 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 LYL1P12980 280 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 CAPN3P20807 821 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ABCD3P28288 659 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 GGT5P36269 586 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 EIF5P55010 431 aaKnown RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 SHC2P98077 582 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 HOXA4Q00056 320 aaPredicted RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 LAMB3Q13751 1172 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 PROSER3Q2NL68 480 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ZNF260Q3ZCT1 412 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 CEP78Q5JTW2 689 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 CC2D1BQ5T0F9 858 aaKnown RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 CEP85Q6P2H3 762 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 VSTM1Q6UX27 236 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 TRIM72Q6ZMU5 477 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ADGRG6Q86SQ4 1221 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 CHD1LQ86WJ1 897 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ZDHHC17Q8IUH5 632 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ARMC8Q8IUR7 673 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 VPS52Q8N1B4 723 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 LINC01465Q8N7H1 131 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 TBC1D22AQ8WUA7 517 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ZBTB10Q96DT7 871 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 HMCESQ96FZ2 354 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 FYTTD1Q96QD9 318 aaKnown RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 CD180Q99467 661 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 NPAS1Q99742 590 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 ABHD14AQ9BUJ0 271 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 HDHD5Q9BXW7 423 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 CTDSP1Q9GZU7 261 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 MROH8Q9H579 483 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 SH3BP4Q9P0V3 963 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 KLQ9UEF7 1012 aa5.86□□□□□ -1.47
VRK1-205ENST00000555402 FBXO2Q9UK22 296 aaPredicted RBP5.86□□□□□ -1.47
VRK1-205ENST00000555402 PRYO14603 147 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 TSPAN4O14817 238 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 CCNT1O60563 726 aaKnown RBP5.85□□□□□ -1.47
VRK1-205ENST00000555402 TULP3O75386 442 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 CYP4B1P13584 511 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 IGFBP2P18065 325 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 PRPH2P23942 346 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 GSTM2P28161 218 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 HOXD12P35452 270 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 ARHGAP8P85298 464 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 CAMK1Q14012 370 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 NAA25Q14CX7 972 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 GLE1Q53GS7 698 aaKnown RBP5.85□□□□□ -1.47
VRK1-205ENST00000555402 FAM69AQ5T7M9 428 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 R3HCC1LQ7Z5L2 792 aaKnown RBP5.85□□□□□ -1.47
VRK1-205ENST00000555402 RNFT2Q96EX2 444 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 KAZALD1Q96I82 304 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 HIC2Q96JB3 615 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 VEZTQ9HBM0 779 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 ARL8BQ9NVJ2 186 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 ASIC5Q9NY37 505 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 CNPY2Q9Y2B0 182 aa5.85□□□□□ -1.47
VRK1-205ENST00000555402 SPATA31A1Q5TZJ5 1347 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 NPIPB13A6NJU9 1138 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 NPIPB5A8MRT5 1133 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 NPIPB4C9JG80 1138 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 TNPO2O14787 897 aaKnown RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 DSCR3O14972 297 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 METTL18O95568 372 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 RPS6KA3P51812 740 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 B4GALNT1Q00973 533 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 KRT32Q14532 448 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 KPNB1Q14974 876 aaKnown RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 LARS2Q15031 903 aaKnown RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 TSTQ16762 297 aaKnown RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 PFKFB3Q16875 520 aaPredicted RBP5.84□□□□□ -1.47
VRK1-205ENST00000555402 HAUS3Q68CZ6 603 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 ADGRF3Q8IZF5 1079 aa5.84□□□□□ -1.47
VRK1-205ENST00000555402 TDRD7Q8NHU6 1098 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms