RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PYROXD2Q8N2H3 581 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 ALG3Q92685 438 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 PGAP3Q96FM1 320 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 CAPS2Q9BXY5 557 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 KDM4CQ9H3R0 1056 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 ZWILCHQ9H900 591 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 LMAN1LQ9HAT1 526 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 C11orf16Q9NQ32 467 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 ARHGEF38Q9NXL2 777 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 DEC1Q9P2X7 70 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 PCYOX1Q9UHG3 505 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 AMACRQ9UHK6 382 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 MRPS17Q9Y2R5 130 aaKnown RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 SIT1Q9Y3P8 196 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 PCDHA3Q9Y5H8 950 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 TBC1D3BA6NDS4 549 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 H0Y626 953 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 TTI1O43156 1089 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 CREB3O43889 395 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 LATS1O95835 1130 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 APODP05090 189 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 GLULP15104 373 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 TCF4P15884 667 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 COMTP21964 271 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 HOXD9P28356 352 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-213ENST00000555386 MIPP30301 263 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 ADRA1BP35368 520 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 HSD17B3P37058 310 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 SLC1A1P43005 524 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 DGKGP49619 791 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 EIF3BP55884 814 aaKnown RBP10.14□□□□□ -0.79
PSEN1-213ENST00000555386 CYP1B1Q16678 543 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 SMTNL2Q2TAL5 461 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 RABGAP1LQ5R372 815 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 FYB2Q5VWT5 728 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 DUPD1Q68J44 220 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 FSTL4Q6MZW2 842 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 RWDD4Q6NW29 188 aaKnown RBP10.14□□□□□ -0.79
PSEN1-213ENST00000555386 FBXL22Q6P050 247 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 Q6ZS52 159 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 TFAP2DQ7Z6R9 452 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 MFN1Q8IWA4 741 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 CCDC117Q8IWD4 279 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-213ENST00000555386 CPXM2Q8N436 756 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 ARFGAP2Q8N6H7 521 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 HJURPQ8NCD3 748 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-213ENST00000555386 PJA1Q8NG27 643 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 WFDC5Q8TCV5 224 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 HSPH1Q92598 858 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 CENPIQ92674 756 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-213ENST00000555386 IGSF8Q969P0 613 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 AZIN2Q96A70 460 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 ARL8AQ96BM9 186 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 ATP6V1G3Q96LB4 118 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 ERP44Q9BS26 406 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 MPP6Q9NZW5 540 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 IP6K2Q9UHH9 426 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 PLAAQ9Y263 795 aa10.14□□□□□ -0.79
PSEN1-213ENST00000555386 E9PAM4 449 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FAM72CH0Y354 149 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 DAPK3O43293 454 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 PRPSAP2O60256 369 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 CACNG3O60359 315 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 PPFIA2O75334 1257 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 LRCH4O75427 683 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 CNTN5O94779 1100 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 ENDOD1O94919 500 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 KAT7O95251 611 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 MYZAPP0CAP1 466 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FNTAP49354 379 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 RWDD2BP57060 319 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FOXK1P85037 733 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 CDH18Q13634 790 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 DSG2Q14126 1118 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 TRADDQ15628 312 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 C2orf27AQ580R0 203 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 PPP6R3Q5H9R7 873 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-213ENST00000555386 TMEM196Q5HYL7 178 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 EFHC2Q5JST6 749 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 KCNT1Q5JUK3 1230 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FAM72AQ5TYM5 149 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 AGBL2Q5U5Z8 902 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 ASTLQ6HA08 431 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FAM72DQ6L9T8 149 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 BNIPLQ7Z465 357 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 TMC3Q7Z5M5 1100 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FAM72BQ86X60 149 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FAM217AQ8IXS0 508 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 CCDC105Q8IYK2 499 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 ARFGAP1Q8N6T3 406 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 C12orf50Q8NA57 414 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-213ENST00000555386 MAIP1Q8WWC4 291 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 PEBP4Q96S96 227 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 PRMT1Q99873 361 aaKnown RBP10.13□□□□□ -0.79
PSEN1-213ENST00000555386 CIPCQ9C0C6 399 aa10.13□□□□□ -0.79
PSEN1-213ENST00000555386 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
PSEN1-213ENST00000555386 TMBIM4Q9HC24 238 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms