RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 IRAK1P51617 712 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 OXCT1P55809 520 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 ARHGAP44Q17R89 818 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 EFHC1Q5JVL4 640 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 PRAMEF14Q5SWL7 426 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 GBP6Q6ZN66 633 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 GATAD2AQ86YP4 633 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 OR52K2Q8NGK3 314 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 SAP25Q8TEE9 199 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 SKA1Q96BD8 255 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 AASDHPPTQ9NRN7 309 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 AJAP1Q9UKB5 411 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 RAXQ9Y2V3 346 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 OR51B4Q9Y5P0 310 aa16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 SETXQ7Z333 2677 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-205ENST00000555052 SYNJ2BP-COX16A0A087WUM0 186 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 GRAP2O75791 330 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 PON1P27169 355 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 EPHA8P29322 1005 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 NNMTP40261 264 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 USP8P40818 1118 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 NXPH1P58417 271 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 AUHQ13825 339 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 EXOC3L4Q17RC7 722 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 C5orf22Q49AR2 442 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 OTUD1Q5VV17 481 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 C19orf48Q6RUI8 117 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 FAM183BPQ6ZVS7 135 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 SLC26A9Q7LBE3 791 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 PASD1Q8IV76 773 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 SERAC1Q96JX3 654 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 RPRD1AQ96P16 312 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 SIX2Q9NPC8 291 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 GDF3Q9NR23 364 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 COX16Q9P0S2 106 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 KIAA1468Q9P260 1216 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 ARHGAP20Q9P2F6 1191 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 SARDHQ9UL12 918 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 PCDHGA1Q9Y5H4 931 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 HS3ST4Q9Y661 456 aa16.14■□□□□ 0.17
ARHGEF40-205ENST00000555052 FAM149AA5PLN7 773 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 TRABD2BA6NFA1 517 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 TLR4O00206 839 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 PLK4O00444 970 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 YKT6O15498 198 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 SLC7A4O43246 635 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 PLRG1O43660 514 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 RTN2O75298 545 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 DAB1O75553 588 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 ERBB2P04626 1255 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 RXRGP48443 463 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 MTA1Q13330 715 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 PTPN20Q4JDL3 420 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 AGBL4Q5VU57 503 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 NAPEPLDQ6IQ20 393 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 DHRS13Q6UX07 377 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 C11orf57Q6ZUT1 292 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 C14orf80Q86SX3 495 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 C1orf131Q8NDD1 294 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 ZNF397Q8NF99 534 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 OR8D1Q8WZ84 308 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 FEM1AQ9BSK4 669 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 KDM4CQ9H3R0 1056 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 ERVMER34-1Q9H9K5 563 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 VANGL2Q9ULK5 521 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 PPM1HQ9ULR3 514 aa16.13■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3DA0A087WVF3 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3IA0A087WXS9 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3EA0A087X179 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3KA0A087X1G2 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3FA6NER0 549 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3LB9A6J9 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 CBX4O00257 560 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 ENC1O14682 589 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 ALOX15BO15296 676 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3HP0C7X1 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 GGCXP38435 758 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 COL9A2Q14055 689 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 COL28A1Q2UY09 1125 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 CCDC157Q569K6 752 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 SFMBT2Q5VUG0 894 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3GQ6DHY5 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3CQ6IPX1 549 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 Q6ZVU0 165 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 KANSL1Q7Z3B3 1105 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 DSG4Q86SJ6 1040 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TMPRSS12Q86WS5 348 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TRIM69Q86WT6 500 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 SPATS2Q86XZ4 545 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D3Q8IZP1 549 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 RNF34Q969K3 372 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 NOX5Q96PH1 765 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 SCUBE2Q9NQ36 999 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 SLC25A13Q9UJS0 675 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 TBC1D30Q9Y2I9 924 aa16.12■□□□□ 0.17
ARHGEF40-205ENST00000555052 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-205ENST00000555052 E9PAM4 449 aa16.11■□□□□ 0.17
ARHGEF40-205ENST00000555052 I6L893 689 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms