RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SLC39A7Q92504 469 aa24.96■■□□□ 1.59
FOXA1-204ENST00000554607 DHTKD1Q96HY7 919 aaPredicted RBP24.96■■□□□ 1.59
FOXA1-204ENST00000554607 HOOK1Q9UJC3 728 aaKnown RBP24.96■■□□□ 1.59
FOXA1-204ENST00000554607 BPTFQ12830 3046 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 KCNU1A8MYU2 1149 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 ATXN7O15265 892 aaPredicted RBP24.95■■□□□ 1.58
FOXA1-204ENST00000554607 PLRG1O43660 514 aaKnown RBP24.95■■□□□ 1.58
FOXA1-204ENST00000554607 SLC2A3P11169 496 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 PDGFRAP16234 1089 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 YWHAZP63104 245 aaKnown RBP24.95■■□□□ 1.58
FOXA1-204ENST00000554607 MEA1Q16626 185 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 RABGAP1LQ5R372 815 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 TRIM69Q86WT6 500 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 CCAR2Q8N163 923 aaKnown RBP24.95■■□□□ 1.58
FOXA1-204ENST00000554607 SNIP1Q8TAD8 396 aaKnown RBP24.95■■□□□ 1.58
FOXA1-204ENST00000554607 RFFLQ8WZ73 363 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 FGF11Q92914 225 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 SLC4A5Q9BY07 1137 aa24.95■■□□□ 1.58
FOXA1-204ENST00000554607 MED7O43513 233 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 RTN2O75298 545 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 IGLV3-25P01717 112 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 VAV1P15498 845 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 ACP1P24666 158 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 PPP1R2P41236 205 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 E2F1Q01094 437 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 EHBP1Q8NDI1 1231 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 FRS2Q8WU20 508 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 THAP9Q9H5L6 903 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 GDPD2Q9HCC8 539 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 SLC25A13Q9UJS0 675 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 CNTN6Q9UQ52 1028 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 CLCA2Q9UQC9 943 aa24.94■■□□□ 1.58
FOXA1-204ENST00000554607 A0A1B0GVM2 712 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 GOLGA6L4A6NEF3 574 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 TCAF2A6NFQ2 919 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 C1QTNF3-AMACRE9PGA6 284 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 PRAMEF26H0Y7S4 382 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 GLDCP23378 1020 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 MAT2AP31153 395 aaKnown RBP24.93■■□□□ 1.58
FOXA1-204ENST00000554607 ACTN2P35609 894 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 ACCSLQ4AC99 568 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 SETMARQ53H47 684 aaPredicted RBP24.93■■□□□ 1.58
FOXA1-204ENST00000554607 TMEM110Q86TL2 294 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 ARHGEF19Q8IW93 802 aa24.93■■□□□ 1.58
FOXA1-204ENST00000554607 ERCC4Q92889 916 aaPredicted RBP24.93■■□□□ 1.58
FOXA1-204ENST00000554607 PRMT1Q99873 361 aaKnown RBP24.93■■□□□ 1.58
FOXA1-204ENST00000554607 NYNRINQ9P2P1 1898 aaKnown RBP24.93■■□□□ 1.58
FOXA1-204ENST00000554607 ARID1BQ8NFD5 2236 aaPredicted RBP24.93■■□□□ 1.58
FOXA1-204ENST00000554607 MYLKQ15746 1914 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 ALOX15BO15296 676 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 RNGTTO60942 597 aaKnown RBP24.92■■□□□ 1.58
FOXA1-204ENST00000554607 KRT5P13647 590 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 EIF4EBP2Q13542 120 aaPredicted RBP24.92■■□□□ 1.58
FOXA1-204ENST00000554607 PROX2Q3B8N5 592 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 HS1BP3Q53T59 392 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 DENND1BQ6P3S1 775 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 KLHDC7BQ96G42 594 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 FCRL3Q96P31 734 aaPredicted RBP24.92■■□□□ 1.58
FOXA1-204ENST00000554607 PPM1HQ9ULR3 514 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 RAI2Q9Y5P3 530 aa24.92■■□□□ 1.58
FOXA1-204ENST00000554607 E5RJQ4 531 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 MCF2LO15068 1137 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 ATP9BO43861 1147 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 ZNF18P17022 549 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 CCR1P32246 355 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 METAP1P53582 386 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 CDK17Q00537 523 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 MTA1Q13330 715 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 ZNF211Q13398 564 aaPredicted RBP24.91■■□□□ 1.58
FOXA1-204ENST00000554607 DCBLD1Q8N8Z6 715 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 KREMEN1Q96MU8 473 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 FAM204AQ9H8W3 233 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 PREBQ9HCU5 417 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 SARDHQ9UL12 918 aa24.91■■□□□ 1.58
FOXA1-204ENST00000554607 HELZ2Q9BYK8 2649 aaKnown RBP24.9■■□□□ 1.58
FOXA1-204ENST00000554607 BRINP1O60477 761 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 INSM1Q01101 510 aaPredicted RBP24.9■■□□□ 1.58
FOXA1-204ENST00000554607 CCDC15Q0P6D6 951 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 CNTN1Q12860 1018 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 AGBL4Q5VU57 503 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 CXorf57Q6NSI4 855 aaKnown RBP24.9■■□□□ 1.58
FOXA1-204ENST00000554607 GPR155Q7Z3F1 870 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 CIR1Q86X95 450 aaPredicted RBP24.9■■□□□ 1.58
FOXA1-204ENST00000554607 ZNF606Q8WXB4 792 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 RNF34Q969K3 372 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 FEM1AQ9BSK4 669 aa24.9■■□□□ 1.58
FOXA1-204ENST00000554607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.89■■□□□ 1.58
FOXA1-204ENST00000554607 SIGLEC6O43699 453 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 LETM1O95202 739 aaPredicted RBP24.89■■□□□ 1.58
FOXA1-204ENST00000554607 PRB1P04280 392 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 GLI1P08151 1106 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 NUMBP49757 651 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 KCNH2Q12809 1159 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 ZNF177Q13360 481 aaPredicted RBP24.89■■□□□ 1.58
FOXA1-204ENST00000554607 DLG2Q15700 870 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 FBXL22Q6P050 247 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 FOXR2Q6PJQ5 311 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 ALG14Q96F25 216 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 TIGD1Q96MW7 591 aa24.89■■□□□ 1.58
FOXA1-204ENST00000554607 RPRD1AQ96P16 312 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms