RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TSPY26PQ9H489 355 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 RXFP3Q9NSD7 469 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 WSB2Q9NYS7 404 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 TAS2R14Q9NYV8 317 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 USP36Q9P275 1121 aaKnown RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 NCKAP1Q9Y2A7 1128 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 TPRP12270 2363 aaKnown RBP10.96□□□□□ -0.66
SHMT2-213ENST00000554600 TARSL2A2RTX5 802 aaKnown RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 CCP110O43303 1012 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 ATMINO43313 823 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 ENDOD1O94919 500 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 OR1E1P30953 314 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 ADRA1BP35368 520 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 PSMD8P48556 350 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 PLK1P53350 603 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 GSCP56915 257 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 RPL7AP62424 266 aaKnown RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 KRT83P78385 493 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 IRX4P78413 519 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 SFSWAPQ12872 951 aaKnown RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 C5orf22Q49AR2 442 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 WDR45BQ5MNZ6 344 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 C6orf118Q5T5N4 469 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 STPG1Q5TH74 334 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 E4F1Q66K89 784 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 STRADAQ7RTN6 431 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF571Q7Z3V5 609 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 MMAAQ8IVH4 418 aaKnown RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 DRC7Q8IY82 874 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 STK40Q8N2I9 435 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 CCDC185Q8N715 623 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 KDM1BQ8NB78 822 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 OR52K2Q8NGK3 314 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 RTKNQ9BST9 563 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 C2orf49Q9BVC5 232 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-213ENST00000554600 ZYG11BQ9C0D3 744 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 TTYH3Q9C0H2 523 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 TMEM74BQ9NUR3 256 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 DLL3Q9NYJ7 618 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 AIPL1Q9NZN9 384 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 OR12D3Q9UGF7 316 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 TBC1D30Q9Y2I9 924 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 PCDH15Q96QU1 1955 aa10.95□□□□□ -0.66
SHMT2-213ENST00000554600 CHD6Q8TD26 2715 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ITIH6Q6UXX5 1313 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 FAM47DPA6NHR8 397 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 DRGXA6NNA5 263 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 CBX4O00257 560 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 SLC30A4O14863 429 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 MID1O15344 667 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 SNAP91O60641 907 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 RNASEH2AO75792 299 aaKnown RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 KRT37O76014 449 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 IL1BP01584 269 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 FTLP02792 175 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 PLEKP08567 350 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 VAV1P15498 845 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 GNSP15586 552 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 PSMA2P25787 234 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 MAOBP27338 520 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 PRKCIP41743 596 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 MAPK8P45983 427 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF143P52747 638 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ATXN3P54252 364 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 HDAC4P56524 1084 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ZBTB16Q05516 673 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 GFPT1Q06210 699 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 NFKBIBQ15653 356 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 DLG2Q15700 870 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 CST6Q15828 149 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 DUOXA1Q1HG43 343 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 UAP1L1Q3KQV9 507 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 FIGNQ5HY92 759 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 EFHC2Q5JST6 749 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 DCAF12L1Q5VU92 463 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 BNIPLQ7Z465 357 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 RABEPKQ7Z6M1 372 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 SLFN11Q7Z7L1 901 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 SETD3Q86TU7 594 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 VPS36Q86VN1 386 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF354CQ86Y25 554 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ATP11CQ8NB49 1132 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 RNF214Q8ND24 703 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 OR7D4Q8NG98 312 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 OR8D1Q8WZ84 308 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF653Q96CK0 615 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF419Q96HQ0 510 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 VCPIP1Q96JH7 1222 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 OMDQ99983 421 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 CNPY3Q9BT09 278 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 SYT11Q9BT88 431 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 GTPBP2Q9BX10 602 aaKnown RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 XPO4Q9C0E2 1151 aaKnown RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 BTBD1Q9H0C5 482 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 RSPH9Q9H1X1 276 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 PABPC3Q9H361 631 aaKnown RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 TMEM9BQ9NQ34 198 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms