RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NDST2P52849 883 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 ZNF423Q2M1K9 1284 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 FAM131BQ86XD5 332 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 DSELQ8IZU8 1212 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 LZTR1Q8N653 840 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 GSDMBQ8TAX9 411 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 ZBED3Q96IU2 234 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 FDXACB1Q9BRP7 624 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 PDGFCQ9NRA1 345 aa17.29■□□□□ 0.36
PPP4R3A-202ENST00000554390 PRSS51A0A1B0GVH4 220 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 RBM47A0AV96 593 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 C7orf72A4D263 438 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 H6PDO95479 791 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 ADORA2BP29275 332 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 CD151P48509 253 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 ABCE1P61221 599 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 SLC9B1Q4ZJI4 515 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 PDCD4Q53EL6 469 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 PPM1LQ5SGD2 360 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 TIFABQ6ZNK6 161 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 CCDC185Q8N715 623 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 DQX1Q8TE96 717 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 USP13Q92995 863 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 VPS50Q96JG6 964 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 NIFKQ9BYG3 293 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 DPEP3Q9H4B8 488 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 TUT1Q9H6E5 874 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 PFKMP08237 780 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 ZNF26P17031 533 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 GOT1P17174 413 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 PTPN1P18031 435 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 TGFBIQ15582 683 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 BNC2Q6ZN30 1099 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 TTC30AQ86WT1 665 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 PLD6Q8N2A8 252 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 COX4I2Q96KJ9 171 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 DCUN1D5Q9BTE7 237 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 GCOM2Q9BZD3 368 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 SNX9Q9Y5X1 595 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 TMEM247A6NEH6 219 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 KCNK1O00180 336 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 GLRA3O75311 464 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 ARSAP15289 507 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 GRK2P25098 689 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 HOXD12P35452 270 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 PIGGQ5H8A4 983 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 C16orf89Q6UX73 402 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 SNX32Q86XE0 403 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 TMEM102Q8N9M5 508 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 KYQ8NBH2 561 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 ACVR1CQ8NER5 493 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 EME1Q96AY2 570 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 KLHL32Q96NJ5 620 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 MRPL45Q9BRJ2 306 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 SELENONQ9NZV5 590 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 NME7Q9Y5B8 376 aa17.28■□□□□ 0.36
PPP4R3A-202ENST00000554390 ARHGEF37A1IGU5 675 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 RNASEH2AO75792 299 aaKnown RBP17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 CAPNS1P04632 268 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 TCN1P20061 433 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 HALP42357 657 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 SLC5A3P53794 718 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 CEACAM7Q14002 265 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 TFDP2Q14188 446 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 STXBP5Q5T5C0 1151 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 CCNYQ8ND76 341 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 SEPT1Q8WYJ6 367 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 EBNA1BP2Q99848 306 aaKnown RBP17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 FRMD8Q9BZ67 464 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 LHX5Q9H2C1 402 aa17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 WDR55Q9H6Y2 383 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-202ENST00000554390 E2F6O75461 281 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 RALBP11234 206 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 SDC4P31431 198 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 IRF9Q00978 393 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 IL31Q6EBC2 164 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 CATSPERGQ6ZRH7 1159 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 PTAR1Q7Z6K3 402 aaPredicted RBP17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 CTU1Q7Z7A3 348 aaKnown RBP17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 MAPK15Q8TD08 544 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 FNIP1Q8TF40 1166 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 SQORQ9Y6N5 450 aa17.27■□□□□ 0.35
PPP4R3A-202ENST00000554390 H3BNH8 94 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 FBP2O00757 339 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 HARS2P49590 506 aaKnown RBP17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 CDH15P55291 814 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 MGAT5BQ3V5L5 792 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 CCDC92Q53HC0 331 aaPredicted RBP17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 EPGNQ6UW88 154 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 CLVS1Q8IUQ0 354 aaPredicted RBP17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 SLC15A3Q8IY34 581 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 PNPLA1Q8N8W4 532 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 PDCD6IPQ8WUM4 868 aaKnown RBP17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 OR52B2Q96RD2 323 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 PAIP1Q9H074 479 aaKnown RBP17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 SEMA6AQ9H2E6 1030 aa17.26■□□□□ 0.35
PPP4R3A-202ENST00000554390 XPNPEP3Q9NQH7 507 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms