RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CLCN6P51797 869 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 MRPS25P82663 173 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 GNA12Q03113 381 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 TNK2Q07912 1038 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 GPS1Q13098 491 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 SERINC3Q13530 473 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 CDH18Q13634 790 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 HNRNPDQ14103 355 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 CBX2Q14781 532 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 MORF4L2Q15014 288 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 POLD3Q15054 466 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 FAM78AQ5JUQ0 283 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 ITPRIPL1Q6GPH6 555 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 CXorf57Q6NSI4 855 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 EMBQ6PCB8 327 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 POTEHQ6S545 545 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 CCNI2Q6ZMN8 369 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 ARHGEF18Q6ZSZ5 1173 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 PCGF5Q86SE9 256 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 HOOK3Q86VS8 718 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 CIR1Q86X95 450 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 CFAP52Q8N1V2 620 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 MICALL1Q8N3F8 863 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 RIN3Q8TB24 985 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 BPIFB1Q8TDL5 484 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 OSCP1Q8WVF1 389 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 HNRNPLLQ8WVV9 542 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 CASKIN2Q8WXE0 1202 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 MAML1Q92585 1016 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 ARHGEF2Q92974 986 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 HMCESQ96FZ2 354 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 CELF6Q96J87 481 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 ZNF599Q96NL3 588 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 PPP1R2P1Q96PQ5 205 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 FOXP3Q9BZS1 431 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 PHACTR1Q9C0D0 580 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 SLC39A8Q9C0K1 460 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 TSPYL1Q9H0U9 437 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 EPC1Q9H2F5 836 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 DPH5Q9H2P9 285 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 HAUS2Q9NVX0 235 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 GRHL1Q9NZI5 618 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 IPO11Q9UI26 975 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 SHOC2Q9UQ13 582 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 HELZP42694 1942 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 DOCK6Q96HP0 2047 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 DOCK4Q8N1I0 1966 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 H0Y626 953 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 TRDMT1O14717 391 aaKnown RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 CHADO15335 359 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 TSPAN3O60637 253 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 PRAMEF11O60813 436 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ADH1CP00326 375 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 LAMP2P13473 410 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 CCNB1P14635 433 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 FCARP24071 287 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 PTPN3P26045 913 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ECHS1P30084 290 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 RPL22P35268 128 aaKnown RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 FDFT1P37268 417 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 IFNAR2P48551 515 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 CARSP49589 748 aaKnown RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 RENBPP51606 427 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 SGSHP51688 502 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 GEMIN4P57678 1058 aaKnown RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 CDK16Q00536 496 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 DLX2Q07687 328 aaPredicted RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 IL10RBQ08334 325 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 FCHO2Q0JRZ9 810 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 WASHC5Q12768 1159 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 SLC12A1Q13621 1099 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 HLTFQ14527 1009 aaKnown RBP eCLIP7.82□□□□□ -1.16
TDP1-209ENST00000554180 RFTN1Q14699 578 aaPredicted RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 PDGFRLQ15198 375 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 TRIP13Q15645 432 aaPredicted RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 TEX44Q53QW1 395 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ANKRD20A2Q5SQ80 823 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ANKRD20A1Q5TYW2 823 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ANKRD20A3Q5VUR7 823 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 FYB2Q5VWT5 728 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 IZUMO3Q5VZ72 239 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 CEP128Q6ZU80 1094 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 MTSS1LQ765P7 747 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 OTOP3Q7RTS5 596 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 MFN1Q8IWA4 741 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 TP53INP2Q8IXH6 220 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 PPIL6Q8IXY8 311 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ADGRG2Q8IZP9 1017 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 DCAF4L2Q8NA75 395 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 GLIS1Q8NBF1 620 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 FIBINQ8TAL6 211 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 NUP210Q8TEM1 1887 aaPredicted RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 AENQ8WTP8 325 aaKnown RBP7.82□□□□□ -1.16
TDP1-209ENST00000554180 DDI1Q8WTU0 396 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 DEPDC1BQ8WUY9 529 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 ANKRD7Q92527 254 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 SUSD6Q92537 303 aa7.82□□□□□ -1.16
TDP1-209ENST00000554180 IRF7Q92985 503 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms