RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SLC12A1Q13621 1099 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 PRKD1Q15139 912 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 TRIP13Q15645 432 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ELF2Q15723 593 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 CCDC85BQ15834 202 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 P3H1Q32P28 736 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 RNF219Q5W0B1 726 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 AFMIDQ63HM1 303 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ARHGEF18Q6ZSZ5 1173 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 PCGF5Q86SE9 256 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ADGRG2Q8IZP9 1017 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 CCDC33Q8N5R6 958 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 SMRP1Q8NCR6 262 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 OSCP1Q8WVF1 389 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 IFT81Q8WYA0 676 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ELSPBP1Q96BH3 223 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 P2RY11Q96G91 374 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 PRICKLE1Q96MT3 831 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 BBS2Q9BXC9 721 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 TRIM31Q9BZY9 425 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 KLC2Q9H0B6 622 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 USP29Q9HBJ7 922 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ARGLU1Q9NWB6 273 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 IPO11Q9UI26 975 aaKnown RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 TRHDEQ9UKU6 1024 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 TBC1D30Q9Y2I9 924 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 USP15Q9Y4E8 981 aaPredicted RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 WNT6Q9Y6F9 365 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
TMEM55B-205ENST00000554028 GOLGA6CA6NDK9 693 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 GOLGA6BA6NDN3 693 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ZSCAN5CA6NGD5 496 aaPredicted RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 NEDD8-MDP1E9PL57 170 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 H3BQ06 376 aaPredicted RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 GFRA2O00451 464 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MATN3O15232 486 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 OPHN1O60890 802 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ERLIN1O75477 346 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 GCATO75600 419 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 GOLGA6DP0CG33 693 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 CCNB1P14635 433 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 KCNA5P22460 613 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 VPS41P49754 854 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 IRAK1P51617 712 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 CAV1Q03135 178 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 GAD2Q05329 585 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 IL10RBQ08334 325 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 HLTFQ14527 1009 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MAP9Q49MG5 647 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 TMCO4Q5TGY1 634 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MARC1Q5VT66 337 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ITPRIPL1Q6GPH6 555 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 WDR93Q6P2C0 686 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 PID1Q7Z2X4 250 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 TMEM25Q86YD3 366 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MFSD6LQ8IWD5 586 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ARHGAP12Q8IWW6 846 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 EIF1ADQ8N9N8 165 aaKnown RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 FIBINQ8TAL6 211 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 DEPDC1BQ8WUY9 529 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ARHGEF2Q92974 986 aaKnown RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 BHMTQ93088 406 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 HLA-CQ95604 372 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 FATE1Q969F0 183 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 RTP4Q96DX8 246 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MYEOVQ96EZ4 313 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 SNF8Q96H20 258 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 PPP1R2P1Q96PQ5 205 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 XPO6Q96QU8 1125 aaKnown RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MYADMQ96S97 322 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 TRIM51Q9BSJ1 452 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 PARD6BQ9BYG5 372 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 SLC2A11Q9BYW1 496 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 FAM129AQ9BZQ8 928 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 DPH5Q9H2P9 285 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 LINC00597Q9H2U6 94 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 POMKQ9H5K3 350 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 UBE2ZQ9H832 354 aaPredicted RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 C10orf88Q9H8K7 445 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ANKZF1Q9H8Y5 726 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ATP13A1Q9HD20 1204 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 NDFIP2Q9NV92 336 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 GOLGA6AQ9NYA3 693 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 KLHL8Q9P2G9 620 aaPredicted RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 DMGDHQ9UI17 866 aaKnown RBP10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 ANAPC5Q9UJX4 755 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 VPS28Q9UK41 221 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 FAM50BQ9Y247 325 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 SNX24Q9Y343 169 aa10.7□□□□□ -0.7
TMEM55B-205ENST00000554028 MYO7AQ13402 2215 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms