RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 C6orf118Q5T5N4 469 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 SPECC1LQ69YQ0 1117 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 NADSYN1Q6IA69 706 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 MMS22LQ6ZRQ5 1243 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 SND1Q7KZF4 910 aaKnown RBP eCLIP9.13□□□□□ -0.95
TDP1-208ENST00000553989 CHSY1Q86X52 802 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 LGI2Q8N0V4 545 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 CFAP52Q8N1V2 620 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 OR2T34Q8NGX1 318 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 OR14C36Q8NHC7 312 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 FIBINQ8TAL6 211 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 DQX1Q8TE96 717 aaKnown RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 SLC35F5Q8WV83 523 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 SLC35C1Q96A29 364 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 TTC17Q96AE7 1141 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 NXPE2Q96DL1 559 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 POM121Q96HA1 1249 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 SERAC1Q96JX3 654 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 PPP1R13BQ96KQ4 1090 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 HSFY1Q96LI6 401 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ELF4Q99607 663 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 IRX2Q9BZI1 471 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 NEUROG2Q9H2A3 272 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 SCUBE2Q9NQ36 999 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 GDF3Q9NR23 364 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 MAN1B1Q9UKM7 699 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ERVW-1Q9UQF0 538 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 PTPRBP23467 1997 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 TMEM131Q92545 1883 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3DA0A087WVF3 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3IA0A087WXS9 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3EA0A087X179 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3KA0A087X1G2 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TARSL2A2RTX5 802 aaKnown RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3FA6NER0 549 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 LRRC10BA6NIK2 292 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3LB9A6J9 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 CBX4O00257 560 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 PLK4O00444 970 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 PSMA7O14818 248 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 YKT6O15498 198 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 RFPL3O75679 317 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 DKK1O94907 266 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 ADH1BP00325 375 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 CALCAP01258 141 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 IL1BP01584 269 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 SRPRAP08240 638 aaKnown RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3HP0C7X1 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 KRT5P13647 590 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 CD46P15529 392 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 SLC8A1P32418 973 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 PMS1P54277 932 aaKnown RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 ECT2LQ008S8 904 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 GABPB1Q06547 395 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 DNAJC3Q13217 504 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 CNGA2Q16280 664 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 PKDCCQ504Y2 493 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 FSCBQ5H9T9 825 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 MS4A13Q5J8X5 152 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 RAP1GAP2Q684P5 730 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3GQ6DHY5 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3CQ6IPX1 549 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 LRRC69Q6ZNQ3 347 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 RRAGAQ7L523 313 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TAC4Q86UU9 113 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TMPRSS12Q86WS5 348 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TBC1D3Q8IZP1 549 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 STK40Q8N2I9 435 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 EID2Q8N6I1 236 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 UBR7Q8N806 425 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 ANKRD20A12PQ8NF67 263 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 PIP4K2CQ8TBX8 421 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TSC1Q92574 1164 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 ERCC4Q92889 916 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 KAT5Q92993 513 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 MYO19Q96H55 970 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 RPL10LQ96L21 214 aaKnown RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 FCRL2Q96LA5 508 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 PANX2Q96RD6 677 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 BAG1Q99933 345 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 TRIM62Q9BVG3 475 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 DKK4Q9UBT3 224 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 INTS6Q9UL03 887 aaKnown RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 FZD4Q9ULV1 537 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 NAALADL1Q9UQQ1 740 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.12□□□□□ -0.95
TDP1-208ENST00000553989 AK5Q9Y6K8 562 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 ACACAQ13085 2346 aa9.12□□□□□ -0.95
TDP1-208ENST00000553989 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
TDP1-208ENST00000553989 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 SYNJ2BP-COX16A0A087WUM0 186 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms