RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LY86O95711 162 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 URODP06132 367 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 RHOP08100 348 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 JMJD7P0C870 316 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 FDPSP14324 419 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TYRP1P17643 537 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SFPQP23246 707 aaKnown RBP eCLIP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TMOD1P28289 359 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 CD38P28907 300 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TKTP29401 623 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 OR1D2P34982 312 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 VIPR2P41587 438 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 EVCP57679 992 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SETQ01105 290 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 CYP4A11Q02928 519 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 RNASELQ05823 741 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 PPP2R5CQ13362 524 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 EMC2Q15006 297 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SART3Q15020 963 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 FAM78AQ5JUQ0 283 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 GLRA4Q5JXX5 417 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ODR4Q5SWX8 454 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 FAM171A1Q5VUB5 890 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 CDCA2Q69YH5 1023 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TCEAL6Q6IPX3 200 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 MAEAQ7L5Y9 396 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 GPRIN1Q7Z2K8 1008 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SRGAP1Q7Z6B7 1085 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 XYLT1Q86Y38 959 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TMC8Q8IU68 726 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TMTC2Q8N394 836 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF713Q8N859 430 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 CDYL2Q8N8U2 506 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TTC8Q8TAM2 541 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TCEAL3Q969E4 200 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 FAM167AQ96KS9 214 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SCLT1Q96NL6 688 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 DCLRE1CQ96SD1 692 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 RTKNQ9BST9 563 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 KIFC3Q9BVG8 833 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SLC26A6Q9BXS9 759 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 TMEM60Q9H2L4 133 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 FBRSL1Q9HCM7 1045 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF334Q9HCZ1 680 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 SEMA4GQ9NTN9 838 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ZSCAN32Q9NX65 697 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ZDHHC7Q9NXF8 308 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 H2AFY2Q9P0M6 372 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 DKK2Q9UBU2 259 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ADAM28Q9UKQ2 775 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 USP18Q9UMW8 372 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 NDRG2Q9UN36 371 aaKnown RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 EPN1Q9Y6I3 576 aaPredicted RBP3.47□□□□□ -1.85
SLIRP-202ENST00000553981 COX11Q9Y6N1 276 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 RALGAPA1Q6GYQ0 2036 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 ANK1P16157 1881 aa3.47□□□□□ -1.85
SLIRP-202ENST00000553981 CNTNAP2Q9UHC6 1331 aa3.46□□□□□ -1.85
SLIRP-202ENST00000553981 PTPRDP23468 1912 aa3.46□□□□□ -1.85
SLIRP-202ENST00000553981 CACNA1AO00555 2505 aa3.46□□□□□ -1.85
SLIRP-202ENST00000553981 A0A1B0GUA9 196 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 GAGE12BA1L429 117 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 GAGE12HA6NDE8 117 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 TBX3O15119 743 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 EXTL3O43909 919 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 MED24O75448 989 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 SEC24DO94855 1032 aaPredicted RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 ABLIM3O94929 683 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 NDUFA10O95299 355 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 OR4Q2P0C623 313 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 IFNAR1P17181 557 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 CCNE1P24864 410 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 YWHABP31946 246 aaKnown RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 SFNP31947 248 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 HSPA4P34932 840 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 FLT3P36888 993 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 RPS9P46781 194 aaKnown RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 QARSP47897 775 aaKnown RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PXNP49023 591 aaPredicted RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 RARRES1P49788 294 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 GZMKP49863 264 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 RAB27AP51159 221 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 CLCNKBP51801 687 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 JAK3P52333 1124 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PSMC5P62195 406 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 ROR1Q01973 937 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PSMD5Q16401 504 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 BEAN1Q3B7T3 259 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 USP41Q3LFD5 358 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 ALKAL1Q6UXT8 129 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 UBE2R2Q712K3 238 aaPredicted RBP3.46□□□□□ -1.86
SLIRP-202ENST00000553981 RD3Q7Z3Z2 195 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 CEP57Q86XR8 500 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 C4orf19Q8IY42 314 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 BLIDQ8IZY5 108 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 FBXL16Q8N461 479 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 PIGOQ8TEQ8 1089 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 LRRC15Q8TF66 581 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 HDAC7Q8WUI4 952 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 RUFY2Q8WXA3 655 aa3.46□□□□□ -1.86
SLIRP-202ENST00000553981 TNPO1Q92973 898 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms