RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CCDC137Q6PK04 289 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 C4orf22Q6V702 233 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ZNF354CQ86Y25 554 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 SUGP1Q8IWZ8 645 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 CCDC105Q8IYK2 499 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 BBS5Q8N3I7 341 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 TSGA13Q96PP4 275 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 VAT1Q99536 393 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 MUC3BQ9H195 1237 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ECT2Q9H8V3 914 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 SP110Q9HB58 689 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 SMARCAL1Q9NZC9 954 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 PCYOX1Q9UHG3 505 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ZNF148Q9UQR1 794 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 DRG1Q9Y295 367 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ECEL1O95672 775 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 CCNCP24863 283 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 STIP1P31948 543 aaKnown RBP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 COILP38432 576 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 IRAK1P51617 712 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 SULT2A1Q06520 285 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 C2orf54Q08AI8 447 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 GRM2Q14416 872 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 PRKD1Q15139 912 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 OASLQ15646 514 aaKnown RBP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 CXorf57Q6NSI4 855 aaKnown RBP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 RHBDF2Q6PJF5 856 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 NPNTQ6UXI9 565 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 NUDT18Q6ZVK8 323 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 TMEM25Q86YD3 366 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ARHGAP12Q8IWW6 846 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 CCDC13Q8IYE1 715 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 AHI1Q8N157 1196 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 CCDC89Q8N998 374 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 CCNYQ8ND76 341 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ATL2Q8NHH9 583 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 C1orf54Q8WWF1 131 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 RSAD2Q8WXG1 361 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ATG4AQ8WYN0 398 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ACDQ96AP0 544 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 MYEOVQ96EZ4 313 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ASIC4Q96FT7 647 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ZNF599Q96NL3 588 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 LRRC3BQ96PB8 259 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 KLC2Q9H0B6 622 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 EBF3Q9H4W6 596 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 ATP13A1Q9HD20 1204 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 DNPEPQ9ULA0 475 aa14.85□□□□□ -0.03
SHMT2-210ENST00000553950 R3HDM2Q9Y2K5 976 aaKnown RBP14.85□□□□□ -0.03
SHMT2-210ENST00000553950 FAM187AA6NFU0 413 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 EFCAB8A8MWE9 144 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 NEBLO76041 1014 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 ARSAP15289 507 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 SP100P23497 879 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 DR1Q01658 176 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 IL10RBQ08334 325 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 AP1B1Q10567 949 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 SERINC3Q13530 473 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 RFTN1Q14699 578 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 EIF4HQ15056 248 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 IL31Q6EBC2 164 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 GSTA5Q7RTV2 222 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 ZC3H18Q86VM9 953 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 ADHFE1Q8IWW8 467 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 KLHL7Q8IXQ5 586 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 MMGT1Q8N4V1 131 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 CASKIN2Q8WXE0 1202 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 ARHGEF2Q92974 986 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 BHMTQ93088 406 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 HMCESQ96FZ2 354 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 CELF6Q96J87 481 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 PPP1R2P1Q96PQ5 205 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 SLC39A8Q9C0K1 460 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 DDX47Q9H0S4 455 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 RAB17Q9H0T7 212 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 LINC00597Q9H2U6 94 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 HPS4Q9NQG7 708 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 DNAJC17Q9NVM6 304 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 AMACRQ9UHK6 382 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 IPO11Q9UI26 975 aaKnown RBP14.84□□□□□ -0.03
SHMT2-210ENST00000553950 GGA2Q9UJY4 613 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 VPS28Q9UK41 221 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 SLC27A6Q9Y2P4 619 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 MFHAS1Q9Y4C4 1052 aa14.84□□□□□ -0.03
SHMT2-210ENST00000553950 REV3LO60673 3130 aa14.83□□□□□ -0.03
SHMT2-210ENST00000553950 LOC730098B7Z3J9 87 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 SGK1O00141 431 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 ASLP04424 464 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PABPC1P11940 636 aaKnown RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 DGKGP49619 791 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PLK1P53350 603 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 SLC10A2Q12908 348 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 SNX1Q13596 522 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PPP1R7Q15435 360 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 P3H1Q32P28 736 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 RNF219Q5W0B1 726 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 TRIM68Q6AZZ1 485 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms