RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 CST8O60676 142 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 POLR2EP19388 210 aaKnown RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 TARSP26639 723 aaKnown RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 SERPINB6P35237 376 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ACVRL1P37023 503 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ETFBP38117 255 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 TNFRSF4P43489 277 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 NUMBP49757 651 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 YBEYP58557 167 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 DYNLT1P63172 113 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 GBE1Q04446 702 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 CCINQ13939 588 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 EIF4HQ15056 248 aaKnown RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 MBLAC2Q68D91 279 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 IL31Q6EBC2 164 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 NYAP1Q6ZVC0 841 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 TP53INP2Q8IXH6 220 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ZNF687Q8N1G0 1237 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 PLD5Q8N7P1 536 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 NETO2Q8NC67 525 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 TTC17Q96AE7 1141 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 HMCESQ96FZ2 354 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 NELL2Q99435 816 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 PSMB7Q99436 277 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 SPON2Q9BUD6 331 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ACE2Q9BYF1 805 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 FOXQ1Q9C009 403 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 CIPCQ9C0C6 399 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 ATP13A1Q9HD20 1204 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 LTB4R2Q9NPC1 389 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 EFR3BQ9Y2G0 817 aa12.54□□□□□ -0.4
SHMT2-209ENST00000553949 MTF2Q9Y483 593 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-209ENST00000553949 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 DFFAO00273 331 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 STK25O00506 426 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 MFSD11O43934 449 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 TJP3O95049 919 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 CXCR5P32302 372 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 PAPOLAP51003 745 aaKnown RBP12.53□□□□□ -0.4
SHMT2-209ENST00000553949 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
SHMT2-209ENST00000553949 UBXN2BQ14CS0 331 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 SEL1L2Q5TEA6 688 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 ZSCAN30Q86W11 494 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 DCAF4L2Q8NA75 395 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 HERPUD2Q9BSE4 406 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 C2orf49Q9BVC5 232 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-209ENST00000553949 COL25A1Q9BXS0 654 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-209ENST00000553949 MFSD1Q9H3U5 465 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 ELOVL2Q9NXB9 296 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 SNX12Q9UMY4 172 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 STARD13Q9Y3M8 1113 aa12.53□□□□□ -0.4
SHMT2-209ENST00000553949 MYOFQ9NZM1 2061 aa12.52□□□□□ -0.4
SHMT2-209ENST00000553949 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ANTXRLA6NF34 631 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ARHGAP42A6NI28 874 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 M0R296 226 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 TNFRSF10AO00220 468 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 CBX4O00257 560 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 FANCGO15287 622 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 KDELR3O43731 214 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 SNAP91O60641 907 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ASLP04424 464 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
SHMT2-209ENST00000553949 DLDP09622 509 aaKnown RBP12.52□□□□□ -0.41
SHMT2-209ENST00000553949 CHRNB1P11230 501 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 TGM2P21980 687 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 GLDCP23378 1020 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 CTSOP43234 321 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-209ENST00000553949 SEC13P55735 322 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ECT2LQ008S8 904 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 SULT2A1Q06520 285 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 GALNT2Q10471 571 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 SLC10A2Q12908 348 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-209ENST00000553949 SERINC3Q13530 473 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 LRRC32Q14392 662 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 PTPRNQ16849 979 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 FBXO43Q4G163 708 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 DGKKQ5KSL6 1271 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 EMC10Q5UCC4 262 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 NPNTQ6UXI9 565 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ZNF354CQ86Y25 554 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 CYB5D2Q8WUJ1 264 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 UCMAQ8WVF2 138 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 ACDQ96AP0 544 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-209ENST00000553949 NAPGQ99747 312 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-209ENST00000553949 OSBPL6Q9BZF3 934 aa12.52□□□□□ -0.41
SHMT2-209ENST00000553949 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms