RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 EME1Q96AY2 570 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 C3orf49Q96BT1 292 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 NAF1Q96HR8 494 aaKnown RBP3.64□□□□□ -1.83
VRK1-202ENST00000553683 ZNF333Q96JL9 665 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 CKAP5Q14008 2032 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 TRBV5-7A0A0A0MS05 114 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 A0A1W2PPC1 479 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 AGAP5A6NIR3 686 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 SAC3D1A6NKF1 404 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 A6NNC1 897 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 H0Y3Z8 333 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 GRM8O00222 908 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 CHRNB1P11230 501 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 HOXB2P14652 356 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 CCKARP32238 428 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 PNPLA4P41247 253 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 GRK6P43250 576 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 RFX2P48378 723 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 THBS3P49746 956 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 GAD2Q05329 585 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 BIRC2Q13490 618 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 C5orf22Q49AR2 442 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 SULT6B1Q6IMI4 303 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 SLC30A9Q6PML9 568 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 CAMK1DQ8IU85 385 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 PELI3Q8N2H9 469 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 FAM110DQ8TAY7 271 aaPredicted RBP3.63□□□□□ -1.83
VRK1-202ENST00000553683 ARRDC3Q96B67 414 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 RPS6KC1Q96S38 1066 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 PAGR1Q9BTK6 254 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 ACTR5Q9H9F9 607 aaPredicted RBP3.63□□□□□ -1.83
VRK1-202ENST00000553683 MAP6D1Q9H9H5 199 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 TMEM248Q9NWD8 314 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 ZDHHC7Q9NXF8 308 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 PLK2Q9NYY3 685 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 SELENONQ9NZV5 590 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 FBXO40Q9UH90 709 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 SRP68Q9UHB9 627 aaKnown RBP3.63□□□□□ -1.83
VRK1-202ENST00000553683 OSGIN2Q9Y236 505 aa3.63□□□□□ -1.83
VRK1-202ENST00000553683 MST1RQ04912 1400 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 C17orf102A2RUQ5 167 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 CXorf65A6NEN9 183 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 NPIPB13A6NJU9 1138 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 NPIPB5A8MRT5 1133 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 NPIPB4C9JG80 1138 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 IKBKBO14920 756 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 VEGFAP15692 232 aaPredicted RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 HOXB6P17509 224 aaKnown RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 PRKCHP24723 683 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 GSTM2P28161 218 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 CDC25AP30304 524 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 P2RX3P56373 397 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 ROR2Q01974 943 aaKnown RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 THOC5Q13769 683 aaKnown RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 GXYLT1Q4G148 440 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 FAM171A1Q5VUB5 890 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 NCAPH2Q6IBW4 605 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 MTFR2Q6P444 385 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 SCN4BQ8IWT1 228 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 KDM1BQ8NB78 822 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 GABPB2Q8TAK5 448 aaPredicted RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 TMEM163Q8TC26 289 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 SPPL3Q8TCT6 385 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 IP6K1Q92551 441 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 KTI12Q96EK9 354 aaPredicted RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 TRIM31Q9BZY9 425 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 AAMDCQ9H7C9 122 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 Q9N2J8 555 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 RASSF1Q9NS23 344 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 SIRT3Q9NTG7 399 aaPredicted RBP3.62□□□□□ -1.83
VRK1-202ENST00000553683 HIF1ANQ9NWT6 349 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 ARL15Q9NXU5 204 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 KIF17Q9P2E2 1029 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 TBC1D14Q9P2M4 693 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 SLC25A13Q9UJS0 675 aa3.62□□□□□ -1.83
VRK1-202ENST00000553683 RPS10-NUDT3A0A1W2PQS6 291 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 KRTAP29-1A8MX34 341 aaPredicted RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 E7EVH7 732 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 IPO5O00410 1097 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 RNMTO43148 476 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 SMAD6O43541 496 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 METTL18O95568 372 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 TK1P04183 234 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 ALPLP05186 524 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 CYP21A2P08686 494 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 CYP4B1P13584 511 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 ADD2P35612 726 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 AARSP49588 968 aaKnown RBP eCLIP3.61□□□□□ -1.83
VRK1-202ENST00000553683 CYP2J2P51589 502 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 ZBTB16Q05516 673 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 ENTPD8Q5MY95 495 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 FAM83BQ5T0W9 1011 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 TMEM199Q8N511 208 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 DPP10Q8N608 796 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 SH3KBP1Q96B97 665 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 TEFMQ96QE5 360 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 TMEM204Q9BSN7 226 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 SF3B5Q9BWJ5 86 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 CADM1Q9BY67 442 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms