RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PIGKQ92643 395 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 TOE1Q96GM8 510 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 ISCUQ9H1K1 167 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 PCED1AQ9H1Q7 454 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 TMPRSS4Q9NRS4 437 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 DONSONQ9NYP3 566 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 MPP6Q9NZW5 540 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 ADAMTS1Q9UHI8 967 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 CDV3Q9UKY7 258 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 SNX10Q9Y5X0 201 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 CXorf51AA0A1B0GTR3 108 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 TTC34A8MYJ7 566 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 ATP9BO43861 1147 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 SIN3BO75182 1162 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 GYPCP04921 128 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 RHOQP17081 205 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 L1CAMP32004 1257 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 PTGER3P43115 390 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 IRAK1P51617 712 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 ELAVL3Q14576 367 aaKnown RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 RSPO4Q2I0M5 234 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 EFHC2Q5JST6 749 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 HGSNATQ68CP4 663 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 RWDD4Q6NW29 188 aaKnown RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 USP30Q70CQ3 517 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 TMC6Q7Z403 805 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 DSG4Q86SJ6 1040 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 FNIP1Q8TF40 1166 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 NUSAP1Q9BXS6 441 aaKnown RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 SGK2Q9HBY8 427 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 DLL3Q9NYJ7 618 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 CNOT8Q9UFF9 292 aaKnown RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 EVLQ9UI08 416 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 PILRBQ9UKJ0 227 aa15.74■□□□□ 0.11
SHMT2-204ENST00000553324 FARP1Q9Y4F1 1045 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-204ENST00000553324 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-204ENST00000553324 TMEM191CA6NGB0 347 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
SHMT2-204ENST00000553324 CCP110O43303 1012 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 RNF8O76064 485 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 GNSP15586 552 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 PSMA2P25787 234 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 HTR7P34969 479 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 MAPKAPK2P49137 400 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 CLCN6P51797 869 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 LIMK1P53667 647 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 ACAP1Q15027 740 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 SF3A2Q15428 464 aaKnown RBP15.73■□□□□ 0.11
SHMT2-204ENST00000553324 CCDC6Q16204 474 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 DUOXA1Q1HG43 343 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 RETSATQ6NUM9 610 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 TFAP2DQ7Z6R9 452 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 DCAF4L2Q8NA75 395 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 OR52K2Q8NGK3 314 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 PTPRN2Q92932 1015 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 RMDN1Q96DB5 314 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 TBC1D31Q96DN5 1066 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 EIF3CQ99613 913 aaKnown RBP15.73■□□□□ 0.11
SHMT2-204ENST00000553324 RTKNQ9BST9 563 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 GPR174Q9BXC1 333 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 BTBD1Q9H0C5 482 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 ZNHIT6Q9NWK9 470 aaKnown RBP15.73■□□□□ 0.11
SHMT2-204ENST00000553324 SUSD2Q9UGT4 822 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 HS3ST2Q9Y278 367 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 SDK1Q7Z5N4 2213 aa15.73■□□□□ 0.11
SHMT2-204ENST00000553324 LRIG2O94898 1065 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 ADH1BP00325 375 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 ITPKAP23677 461 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 HNRNPH3P31942 346 aaKnown RBP15.72■□□□□ 0.11
SHMT2-204ENST00000553324 CASP14P31944 242 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 STK19P49842 368 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-204ENST00000553324 GNA12Q03113 381 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 DLG2Q15700 870 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 CST6Q15828 149 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 RAB6CQ53S08 254 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 MANEALQ5VSG8 457 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 FAM46CQ5VWP2 391 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 PEAR1Q5VY43 1037 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-204ENST00000553324 SLC23A3Q6PIS1 610 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 ARMCX6Q7L4S7 300 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 RGL4Q8IZJ4 473 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 SH2D3CQ8N5H7 860 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 DEFB119Q8N690 84 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 CCDC185Q8N715 623 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 ATP11CQ8NB49 1132 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 RNF214Q8ND24 703 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 GANCQ8TET4 914 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 FRS2Q8WU20 508 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 ZNF653Q96CK0 615 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 HSPA12BQ96MM6 686 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 FAM129BQ96TA1 746 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 EPAS1Q99814 870 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 SPON2Q9BUD6 331 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 RAB6CQ9H0N0 254 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 TMEM248Q9NWD8 314 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 FZD10Q9ULW2 581 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms