RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ABCF3Q9NUQ8 709 aa6.15□□□□□ -1.42
SCFD1-208ENST00000553278 GIMAP4Q9NUV9 329 aa6.15□□□□□ -1.42
SCFD1-208ENST00000553278 CPSF2Q9P2I0 782 aaKnown RBP6.15□□□□□ -1.42
SCFD1-208ENST00000553278 AMFRQ9UKV5 643 aa6.15□□□□□ -1.42
SCFD1-208ENST00000553278 GABRQQ9UN88 632 aa6.15□□□□□ -1.42
SCFD1-208ENST00000553278 MTMR6Q9Y217 621 aa6.15□□□□□ -1.42
SCFD1-208ENST00000553278 SESN1Q9Y6P5 492 aa6.15□□□□□ -1.42
SCFD1-208ENST00000553278 XDHP47989 1333 aa6.15□□□□□ -1.43
SCFD1-208ENST00000553278 LRRC53A6NM62 1247 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 TTC34A8MYJ7 566 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 AHRRA9YTQ3 701 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 CDKL5O76039 1030 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 NXPH3O95157 252 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 HOXB9P17482 250 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 FMO4P31512 558 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 GJC1P36383 396 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 SCNN1GP51170 649 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 HSD17B4P51659 736 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 LINC00310P59036 64 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 PSMC6P62333 389 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 B4GALNT1Q00973 533 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 RESTQ13127 1097 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 CRHR2Q13324 411 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 KIAA1614Q5VZ46 1190 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 NAPEPLDQ6IQ20 393 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 MTFR2Q6P444 385 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 IL27RAQ6UWB1 636 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 ADGRA1Q86SQ6 560 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 IQCA1Q86XH1 822 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 ARHGAP12Q8IWW6 846 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 ZNF713Q8N859 430 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 POC5Q8NA72 575 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 LPIN2Q92539 896 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 FAM89AQ96GI7 184 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 CCDC34Q96HJ3 373 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 PGAM5Q96HS1 289 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 FAM84AQ96KN4 292 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 JAKMIP1Q96N16 626 aaKnown RBP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 NCAPGQ9BPX3 1015 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 ALG8Q9BVK2 526 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 STRA6Q9BX79 667 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 SLC32A1Q9H598 525 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 FBRSL1Q9HCM7 1045 aaKnown RBP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 CD320Q9NPF0 282 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 AKIP1Q9NQ31 210 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 RRP7BPQ9NSQ0 103 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 SPATS2LQ9NUQ6 558 aaKnown RBP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 MARCH4Q9P2E8 410 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-208ENST00000553278 ADAM18Q9Y3Q7 739 aa6.14□□□□□ -1.43
SCFD1-208ENST00000553278 C17orf113A0A1B0GUU1 675 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 NPEPPSL1A6NEC2 478 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 MARCH11A6NNE9 402 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 TP73O15350 636 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 TACC1O75410 805 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 KAT7O95251 611 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 OR2C1O95371 312 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 BAG2O95816 211 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 RB1P06400 928 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 GALTP07902 379 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 RHOP08100 348 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 RAD23AP54725 363 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 RRP1P56182 461 aaKnown RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 SLC37A1P57057 533 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 PPARDQ03181 441 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 NIPAL4Q0D2K0 466 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 TNFAIP1Q13829 316 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 FRG1Q14331 258 aaKnown RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 COG2Q14746 738 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 ERCC6LQ2NKX8 1250 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 ATG9BQ674R7 924 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 C17orf99Q6UX52 265 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 KYAT3Q6YP21 454 aaKnown RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 GSTA5Q7RTV2 222 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 PRRT2Q7Z6L0 340 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 TADA2BQ86TJ2 420 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 DNAAF5Q86Y56 855 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 LAS2Q8IYD9 372 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 CPXM2Q8N436 756 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 MYCBPAPQ8TBZ2 947 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 PRPF31Q8WWY3 499 aaKnown RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 HSPH1Q92598 858 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 AKAP1Q92667 903 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 SLC22A18Q96BI1 424 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 SAT2Q96F10 170 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 ZNF764Q96H86 408 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 PGBD1Q96JS3 809 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 RNF26Q9BY78 433 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-208ENST00000553278 ATP8A2Q9NTI2 1148 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 EHD3Q9NZN3 535 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 HSPB7Q9UBY9 170 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 RASAL2Q9UJF2 1139 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 MKLN1Q9UL63 735 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 SNX5Q9Y5X3 404 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 ZNF536O15090 1300 aa6.13□□□□□ -1.43
SCFD1-208ENST00000553278 A8MZ25 164 aa6.12□□□□□ -1.43
SCFD1-208ENST00000553278 DSCR3O14972 297 aa6.12□□□□□ -1.43
SCFD1-208ENST00000553278 FOXS1O43638 330 aa6.12□□□□□ -1.43
SCFD1-208ENST00000553278 STRNO43815 780 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms