RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TMEM191CA6NGB0 347 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 GOLGA6L19H0YKK7 550 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 SLC30A4O14863 429 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 MOCS3O95396 460 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 HOXD12P35452 270 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 NUMBP49757 651 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 TPM4P67936 248 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 KLHL30Q0D2K2 578 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 RNF219Q5W0B1 726 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-227ENST00000553256 LYSMD4Q5XG99 296 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 PPP1R2P3Q6NXS1 205 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 CYP4V2Q6ZWL3 525 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-227ENST00000553256 CYP2U1Q7Z449 544 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 CCDC117Q8IWD4 279 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-227ENST00000553256 CADM4Q8NFZ8 388 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 C1orf216Q8TAB5 229 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 NETO1Q8TDF5 533 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 DNASE2BQ8WZ79 361 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 VOPP1Q96AW1 172 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 CNPY3Q9BT09 278 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 TRIM7Q9C029 511 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 OR12D3Q9UGF7 316 aa19.8■□□□□ 0.76
PTCH1-227ENST00000553256 PCDH15Q96QU1 1955 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 EDDM13A0A1B0GTR0 161 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ILVBLA1L0T0 632 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ZBTB24O43167 697 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-227ENST00000553256 MAP3K13O43283 966 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ATMINO43313 823 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF821O75541 412 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-227ENST00000553256 LRIG2O94898 1065 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 CD160O95971 181 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 MT-CO1P00395 513 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 FTLP02792 175 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-227ENST00000553256 PLEKP08567 350 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-227ENST00000553256 OXTRP30559 389 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ST8SIA6P61647 398 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 SLC23A3Q6PIS1 610 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 LRRC31Q6UY01 552 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ARMCX6Q7L4S7 300 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 DEFB119Q8N690 84 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 FNIP1Q8TF40 1166 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 IQCDQ96DY2 449 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ORAI3Q9BRQ5 295 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 ZYG11BQ9C0D3 744 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 RETREG1Q9H6L5 497 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 CAPN10Q9HC96 672 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 SERGEFQ9UGK8 458 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 VPS51Q9UID3 782 aa19.79■□□□□ 0.76
PTCH1-227ENST00000553256 CEP192Q8TEP8 1941 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 CACNA1EQ15878 2313 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.78■□□□□ 0.76
PTCH1-227ENST00000553256 TMCO5BA8MYB1 307 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 CDX4O14627 284 aaPredicted RBP19.78■□□□□ 0.76
PTCH1-227ENST00000553256 SNAP91O60641 907 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 SRGAP2O75044 1071 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 RTN2O75298 545 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 ACSL1P33121 698 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 IRX4P78413 519 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 PUM1Q14671 1186 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF776Q68DI1 518 aaPredicted RBP19.78■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF783Q6ZMS7 281 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 TFAP2DQ7Z6R9 452 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 CACUL1Q86Y37 369 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 SH2D3CQ8N5H7 860 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 DCAF4L2Q8NA75 395 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 PIGKQ92643 395 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 HSPA12BQ96MM6 686 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 ACE2Q9BYF1 805 aaPredicted RBP19.78■□□□□ 0.76
PTCH1-227ENST00000553256 PABPC3Q9H361 631 aaKnown RBP19.78■□□□□ 0.76
PTCH1-227ENST00000553256 TSPY26PQ9H489 355 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 TMEM248Q9NWD8 314 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 ARHGAP20Q9P2F6 1191 aa19.78■□□□□ 0.76
PTCH1-227ENST00000553256 NCOR2Q9Y618 2525 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 METTL12A8MUP2 240 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 RHOCP08134 193 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 SRCP12931 536 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 RHOQP17081 205 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 GLDCP23378 1020 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 L1CAMP32004 1257 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 ARL13BQ3SXY8 428 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 C6orf118Q5T5N4 469 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 USP30Q70CQ3 517 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 PYROXD2Q8N2H3 581 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 STK40Q8N2I9 435 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 OR7D4Q8NG98 312 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 PPP1R9BQ96SB3 815 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 GPR174Q9BXC1 333 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 PCED1AQ9H1Q7 454 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 NOL6Q9H6R4 1146 aaKnown RBP19.77■□□□□ 0.76
PTCH1-227ENST00000553256 PARVAQ9NVD7 372 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 ADAMTS1Q9UHI8 967 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 VPS28Q9UK41 221 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 FZD10Q9ULW2 581 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 BZW2Q9Y6E2 419 aaKnown RBP19.77■□□□□ 0.76
PTCH1-227ENST00000553256 SLCO1B1Q9Y6L6 691 aa19.77■□□□□ 0.76
PTCH1-227ENST00000553256 ATXN2Q99700 1313 aaKnown RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 PI4KAP42356 2102 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 SPTBN2O15020 2390 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 NYNRINQ9P2P1 1898 aaKnown RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 CXorf51AA0A1B0GTR3 108 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms