RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 HLA-DRAP01903 254 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 ITGB2P05107 769 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 CR2P20023 1033 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 MZF1P28698 734 aaPredicted RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 MAT2AP31153 395 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 CTSOP43234 321 aaPredicted RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 HS1BP3Q53T59 392 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 AZIN2Q96A70 460 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 MYEOVQ96EZ4 313 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 ULBP1Q9BZM6 244 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 TMEM63CQ9P1W3 806 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 PCDHA7Q9UN72 937 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 GOLGA6L7A0A1B0GV03 622 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 K7ESM1 405 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 IKBKBO14920 756 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 SCAMP1O15126 338 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 NOBOXO60393 691 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 RTN2O75298 545 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 TKTL1P51854 596 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 SERINC3Q13530 473 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 ZSCAN23Q3MJ62 389 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 SETMARQ53H47 684 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 FSCBQ5H9T9 825 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 BSPRYQ5W0U4 402 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 MSANTD2Q6P1R3 559 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC9A9Q8IVB4 645 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 MFN1Q8IWA4 741 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 PDILTQ8N807 584 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 IFI44Q8TCB0 444 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 MAPK15Q8TD08 544 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 EXTL1Q92935 676 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 SGF29Q96ES7 293 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 PRICKLE1Q96MT3 831 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 C7orf25Q9BPX7 421 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 LRRC27Q9C0I9 530 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 ABCG4Q9H172 646 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 UNC13CQ8NB66 2214 aa11.75□□□□□ -0.53
SUPT16H-202ENST00000552829 CACNA1DQ01668 2161 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 YJEFN3A6XGL0 299 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 E7ENQ6 273 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 ACSL4O60488 711 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 CLSTN1O94985 981 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 THEGLP0DJG4 465 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 ALPPL2P10696 532 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 SFTPCP11686 197 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 INHBCP55103 352 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 RPS24P62847 133 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 TLE1Q04724 770 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 ELAVL3Q14576 367 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 PITRM1Q5JRX3 1037 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 AGBL4Q5VU57 503 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 NADSYN1Q6IA69 706 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 MMS22LQ6ZRQ5 1243 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 ANKRD52Q8NB46 1076 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 HJURPQ8NCD3 748 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 TPCN2Q8NHX9 752 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 WDR36Q8NI36 951 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 FRS2Q8WU20 508 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 EDEM1Q92611 657 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 PSMG3-AS1Q96PY0 264 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 NIF3L1Q9GZT8 377 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 STIM2Q9P246 746 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 ACSL6Q9UKU0 697 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 SARDHQ9UL12 918 aa11.74□□□□□ -0.53
SUPT16H-202ENST00000552829 EME2A4GXA9 379 aaPredicted RBP11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 TULP2O00295 520 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 TCEA3O75764 348 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 TNFSF15O95150 251 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 IL1BP01584 269 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 ITGA2BP08514 1039 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 FAM87AP0C7U9 286 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 VAV1P15498 845 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 CD58P19256 250 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 FECHP22830 423 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 TAS2R38P59533 333 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 CNTN1Q12860 1018 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 POM121L1PQ3SYA9 428 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 USP53Q70EK8 1073 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 UNC13DQ70J99 1090 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 SCML4Q8N228 414 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 ARL14Q8N4G2 192 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC4A11Q8NBS3 891 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 OR13H1Q8NG92 308 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 GOLGA5Q8TBA6 731 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 RNF139Q8WU17 664 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 DUSP23Q9BVJ7 150 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 CUEDC2Q9H467 287 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 GPR27Q9NS67 375 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms