RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ARRB1P49407 418 aaPredicted RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ACADVLP49748 655 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 PLK1P53350 603 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 NXPH1P58417 271 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 NCAPHQ15003 741 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 KRT31Q15323 416 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 SFMBT2Q5VUG0 894 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ENOSF1Q7L5Y1 443 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 KANSL1Q7Z3B3 1105 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 TMEM110Q86TL2 294 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 IQCHQ86VS3 1027 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ARHGEF19Q8IW93 802 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 CACTIN-AS1Q8N1I8 211 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 STK40Q8N2I9 435 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ADAM32Q8TC27 787 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 FRS2Q8WU20 508 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 SERAC1Q96JX3 654 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 CNDP2Q96KP4 475 aaKnown RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 UBE2TQ9NPD8 197 aaPredicted RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 TAB2Q9NYJ8 693 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ARHGAP20Q9P2F6 1191 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 XPO7Q9UIA9 1087 aaKnown RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 BPTFQ12830 3046 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 GOLGA4Q13439 2230 aaKnown RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 KNTC1P50748 2209 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 SLC7A4O43246 635 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 RFPL3O75679 317 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 MOCS2O96007 188 aaPredicted RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 APOEP02649 317 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 JUPP14923 745 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 ZNF18P17022 549 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 TACR2P21452 398 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 MZF1P28698 734 aaPredicted RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 DRD3P35462 400 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 HNF1BP35680 557 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 NUDT1P36639 197 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 PSMD8P48556 350 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 YWHAZP63104 245 aaKnown RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 SULT2A1Q06520 285 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 DNAJC3Q13217 504 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 ILKQ13418 452 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 GSE1Q14687 1217 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 RTP5Q14D33 572 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 SLC45A4Q5BKX6 768 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 ZC3H12AQ5D1E8 599 aaKnown RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 RNF219Q5W0B1 726 aaPredicted RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 NAPEPLDQ6IQ20 393 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 FBXL19Q6PCT2 694 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 LGI2Q8N0V4 545 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 OXR1Q8N573 874 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 MFSD2AQ8NA29 543 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 OR14C36Q8NHC7 312 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 FAM149B1Q96BN6 582 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 NXPE2Q96DL1 559 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 SPAG5Q96R06 1193 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 NRSN2Q9GZP1 204 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 VPS16Q9H269 839 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 POPDC2Q9HBU9 364 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 APEX2Q9UBZ4 518 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 TJP2Q9UDY2 1190 aa12.21□□□□□ -0.45
CKAP4-202ENST00000552828 LIMA1Q9UHB6 759 aaKnown RBP12.21□□□□□ -0.45
CKAP4-202ENST00000552828 TMEM131Q92545 1883 aa12.21□□□□□ -0.46
CKAP4-202ENST00000552828 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.46
CKAP4-202ENST00000552828 LRRC10BA6NIK2 292 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 CBX4O00257 560 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 CAPN9O14815 690 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 TRUB2O95900 331 aaKnown RBP12.2□□□□□ -0.46
CKAP4-202ENST00000552828 IL1BP01584 269 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 NNMTP40261 264 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
CKAP4-202ENST00000552828 STK19P49842 368 aaPredicted RBP12.2□□□□□ -0.46
CKAP4-202ENST00000552828 COPB1P53618 953 aaKnown RBP12.2□□□□□ -0.46
CKAP4-202ENST00000552828 PPP2CBP62714 309 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 PPP2CAP67775 309 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 OVGP1Q12889 678 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 FKBP15Q5T1M5 1219 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 C6orf118Q5T5N4 469 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
CKAP4-202ENST00000552828 RAP1GAP2Q684P5 730 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 DENND1BQ6P3S1 775 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 CHSY1Q86X52 802 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 SPATS2Q86XZ4 545 aaKnown RBP12.2□□□□□ -0.46
CKAP4-202ENST00000552828 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 CRELD1Q96HD1 420 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 ST7Q9NRC1 585 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 CYTH4Q9UIA0 394 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 PPM1HQ9ULR3 514 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms