RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PSAT1Q9Y617 370 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 AP3B1O00203 1094 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 MATN3O15232 486 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 DCTN3O75935 186 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 USP1O94782 785 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 IL1BP01584 269 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 SLC2A3P11169 496 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 SLC11A1P49279 550 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 SETDB1Q15047 1291 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 ANKRD20A4Q4UJ75 823 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 OTOP3Q7RTS5 596 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 TRIM42Q8IWZ5 723 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 TTC9BQ8N6N2 239 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 RTL3Q8N8U3 475 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 ARMC2Q8NEN0 867 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 SEPT8Q92599 483 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 ZNF669Q96BR6 464 aaPredicted RBP14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 NDFIP2Q9NV92 336 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 MARCH5Q9NX47 278 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 UBP1Q9NZI7 540 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 LRFN2Q9ULH4 789 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 ZCWPW2A0A1B0GU75 182 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 FAM237BA0A1B0GVD1 139 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 FAM92AA1XBS5 289 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 CFAP73A6NFT4 308 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 WASH4PA8MWX3 477 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 FKTNO75072 461 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 GP5P40197 560 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 PRMT2P55345 433 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 TBX4P57082 545 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 STXBP5Q5T5C0 1151 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 GRTP1Q5TC63 336 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 PIK3R6Q5UE93 754 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 LINC00523Q86TU6 105 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 B3GALT6Q96L58 329 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 FCRL5Q96RD9 977 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 CPNE1Q99829 537 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 IL22Q9GZX6 179 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 MYLK2Q9H1R3 596 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 GLOD4Q9HC38 313 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 IL1RAPL1Q9NZN1 696 aa14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 AAR2Q9Y312 384 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-216ENST00000552199 NYNRINQ9P2P1 1898 aaKnown RBP14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 C2CD2LO14523 706 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 HGSO14964 777 aaPredicted RBP14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 TGDSO95455 350 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 ALDOAP04075 364 aaKnown RBP14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 ITGA2BP08514 1039 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 DNAJB2P25686 324 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 YWHAQP27348 245 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 MAP2K2P36507 400 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 ARPP19P56211 112 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 CDH17Q12864 832 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 OVGP1Q12889 678 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 TCTN1Q2MV58 587 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 FUT10Q6P4F1 479 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 FAM43BQ6ZT52 329 aaPredicted RBP14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 LRRC49Q8IUZ0 686 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 RFWD2Q8NHY2 731 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 GPR152Q8TDT2 470 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 LRRC37BQ96QE4 947 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 MECRQ9BV79 373 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 TRIM55Q9BYV6 548 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 MPP6Q9NZW5 540 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 SIRPGQ9P1W8 387 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 FNIP2Q9P278 1114 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 TXNDC16Q9P2K2 825 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
RAB3IP-216ENST00000552199 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TPP1O14773 563 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 BIRC5O15392 142 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ATP9BO43861 1147 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TBC1D4O60343 1298 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SOAT2O75908 522 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TPH1P17752 444 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 HNRNPH1P31943 449 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SKIV2L2P42285 1042 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 GPR17Q13304 367 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TIGD7Q6NT04 549 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 KYAT3Q6YP21 454 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 NPAS4Q8IUM7 802 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 NUDCD3Q8IVD9 361 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ZNF683Q8IZ20 524 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 CRIPAKQ8N1N5 446 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SPATA22Q8NHS9 363 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SPPL2BQ8TCT7 592 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ZNF296Q8WUU4 475 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 FBXO32Q969P5 355 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 KLC4Q9NSK0 619 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 CLIC5Q9NZA1 410 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 HCSTQ9UBK5 93 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SLC27A5Q9Y2P5 690 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TET1Q8NFU7 2136 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 GREB1Q4ZG55 1949 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms