RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SLC6A17Q9H1V8 727 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 PARD6AQ9NPB6 346 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 USP36Q9P275 1121 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 MBD1Q9UIS9 605 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 SLC25A13Q9UJS0 675 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 FZD10Q9ULW2 581 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 CYP8B1Q9UNU6 501 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 NEU3Q9UQ49 428 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 INVSQ9Y283 1065 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 CEP250Q9BV73 2442 aa15.83■□□□□ 0.12
PRPF40B-211ENST00000551063 DCHS1Q96JQ0 3298 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 EDDM13A0A1B0GTR0 161 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 TARSL2A2RTX5 802 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 FAM72CH0Y354 149 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 IGLV3-19P01714 112 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 HTR7P34969 479 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 ETFBP38117 255 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 EIF4A3P38919 411 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 TBX2Q13207 712 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 SLC18A3Q16572 532 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 CCDC122Q5T0U0 273 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 FAM72AQ5TYM5 149 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 FAM72DQ6L9T8 149 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 NLRP14Q86W24 1093 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 FAM72BQ86X60 149 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 ERLEC1Q96DZ1 483 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 EPAS1Q99814 870 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 TRIM7Q9C029 511 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 THAP2Q9H0W7 228 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 RBSNQ9H1K0 784 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 RSPH9Q9H1X1 276 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 TMEM248Q9NWD8 314 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 MYO1AQ9UBC5 1043 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 SLCO3A1Q9UIG8 710 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 HS3ST2Q9Y278 367 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 CKAP5Q14008 2032 aa15.82■□□□□ 0.12
PRPF40B-211ENST00000551063 CXorf51AA0A1B0GTR3 108 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 TTC34A8MYJ7 566 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 MAP3K13O43283 966 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 AP5Z1O43299 807 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 ATP9BO43861 1147 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 SIN3BO75182 1162 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 RNF8O76064 485 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 CYP1A2P05177 515 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 ACADMP11310 421 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 CD6P30203 668 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 OXTRP30559 389 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 DPP6P42658 865 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 STK19P49842 368 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 CLCN6P51797 869 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 SEMA3BQ13214 749 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 ACAP1Q15027 740 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 CSRP2Q16527 193 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 ASTE1Q2TB18 679 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 ZNF776Q68DI1 518 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 RWDD4Q6NW29 188 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 PSTKQ8IV42 348 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 FRMD1Q8N878 549 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 RPL10LQ96L21 214 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 PSMB7Q99436 277 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 DEF6Q9H4E7 631 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 ITM2CQ9NQX7 267 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 SEMA4GQ9NTN9 838 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 SCML1Q9UN30 329 aa15.81■□□□□ 0.12
PRPF40B-211ENST00000551063 A0A0D9SEW6 157 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 AKR1B15C9JRZ8 316 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 PRPSAP2O60256 369 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 RNASEH1O60930 286 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 LRCH4O75427 683 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 DNTTP04053 509 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 EPHB2P29323 1055 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 PCK1P35558 622 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 MPLP40238 635 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 TPMTP51580 245 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 RPS14P62263 151 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 RPL6Q02878 288 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 GNA12Q03113 381 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 GFPT1Q06210 699 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 ELAVL3Q14576 367 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 TTC31Q49AM3 519 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 C9orf64Q5T6V5 341 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 CACUL1Q86Y37 369 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 ARFGAP1Q8N6T3 406 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 NIPA2Q8N8Q9 360 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 RTL3Q8N8U3 475 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 OR7D4Q8NG98 312 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 NETO1Q8TDF5 533 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 FRS2Q8WU20 508 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 PTPRN2Q92932 1015 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 MRFAP1L1Q96HT8 127 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 ARRDC1-AS1Q9H2J1 176 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 MTG2Q9H4K7 406 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 CD93Q9NPY3 652 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 WSB2Q9NYS7 404 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 VPS51Q9UID3 782 aa15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-211ENST00000551063 SPAG17Q6Q759 2223 aa15.79■□□□□ 0.12
PRPF40B-211ENST00000551063 SDK1Q7Z5N4 2213 aa15.79■□□□□ 0.12
PRPF40B-211ENST00000551063 BCLAF3A2AJT9 711 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-211ENST00000551063 FGF10O15520 208 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms