RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ZCCHC9Q8N567 271 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 TCP10LQ8TDR4 215 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 LENG9Q96B70 501 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 CPA4Q9UI42 421 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 FBXL21Q9UKT6 434 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 RGPD5Q99666 1765 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 SLC5A5Q92911 643 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 ZNF112Q9UJU3 913 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 STON1Q9Y6Q2 735 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 EFCAB10A6NFE3 127 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 LACTBL1A8MY62 500 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 SLC6A3Q01959 620 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 LGI2Q8N0V4 545 aa12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 UNKQ9C0B0 810 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM208AQ9UK61 1670 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 H7C0S8 307 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 CYP1A1P04798 512 aaPredicted RBP12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 SERPINA4P29622 427 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 CCDC167Q9P0B6 97 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 ZNF24P17028 368 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 NEK3P51956 506 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 IL2P60568 153 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 CREMQ03060 361 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 BMPR2Q13873 1038 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 PCBP1Q15365 356 aaKnown RBP eCLIP12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 PPM1LQ5SGD2 360 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 IZUMO1Q8IYV9 350 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 ENKURQ8TC29 256 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 PGLYRP2Q96PD5 576 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 HGH1Q9BTY7 390 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 CROTQ9UKG9 612 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 INVSQ9Y283 1065 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 MED26O95402 600 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 LDLRP01130 860 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 LRPAP1P30533 357 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 SOX10P56693 466 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 ARMC12Q5T9G4 340 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 ZDHHC13Q8IUH4 622 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 RTL3Q8N8U3 475 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 ITFG1Q8TB96 612 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 ACTRT2Q8TDY3 377 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 VAT1Q99536 393 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 SLC39A8Q9C0K1 460 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 POLR1EQ9GZS1 481 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 SPATA2Q9UM82 520 aa12.71□□□□□ -0.38
RAB3IP-212ENST00000550536 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 S100A13Q99584 98 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 KIFC1Q9BW19 673 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 CLEC4MQ9H2X3 399 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 KLHL31Q9H511 634 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 CNTRLQ7Z7A1 2325 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TMEM237Q96Q45 408 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ATXN3LQ9H3M9 355 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 CDHR5Q9HBB8 845 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ARL15Q9NXU5 204 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 CHADO15335 359 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 SGTAO43765 313 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 PHLPP1O60346 1717 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 CCR4P51679 360 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RSBN1Q5VWQ0 802 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RD3Q7Z3Z2 195 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 METTL6Q8TCB7 284 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 PEAK1Q9H792 1746 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ASNA1O43681 348 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TAF13Q15543 124 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ZPBP2Q6X784 338 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ZNF621Q6ZSS3 439 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 MIEF2Q96C03 454 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 PDGFDQ9GZP0 370 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 REXO4Q9GZR2 422 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ARHGAP28Q9P2N2 729 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 ADHFE1Q8IWW8 467 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TRAPPC9Q96Q05 1148 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 FAM126AQ9BYI3 521 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 A0A096LPK6 155 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 HIST1H2ABP04908 130 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 WARSP23381 471 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 FMO4P31512 558 aa12.7□□□□□ -0.38
RAB3IP-212ENST00000550536 MAPKAPK2P49137 400 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms