RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PDCLQ13371 301 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 KCNJ12Q14500 433 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 STAT4Q14765 748 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 NAPEPLDQ6IQ20 393 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 SAP25Q8TEE9 199 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 EBF2Q9HAK2 575 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 COX16Q9P0S2 106 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 DMTF1Q9Y222 760 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 A0A1W2PR77 199 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 BIN1O00499 593 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 STK19P49842 368 aaPredicted RBP23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 CAMK2BQ13554 666 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 SMYD5Q6GMV2 418 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 IQCHQ86VS3 1027 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 DEFB106AQ8N104 65 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 PPP1R13BQ96KQ4 1090 aa23.76■■□□□ 1.39
SMARCD1-209ENST00000550477 ALOX15BO15296 676 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 RXRGP48443 463 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 PTK2Q05397 1052 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 HS1BP3Q53T59 392 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 EID2Q8N6I1 236 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 NXPE2Q96DL1 559 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 CCDC114Q96M63 670 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 PRMT1Q99873 361 aaKnown RBP23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 SYNCQ9H7C4 482 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 TMEM51Q9NW97 253 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 CYTH4Q9UIA0 394 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 SPEGQ15772 3267 aa23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 COL5A1P20908 1838 aaPredicted RBP23.75■■□□□ 1.39
SMARCD1-209ENST00000550477 TP53BP1Q12888 1972 aaPredicted RBP23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 LATO43561 262 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 CLDN11O75508 207 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 BMP6P22004 513 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 EPHA8P29322 1005 aaPredicted RBP23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 NXPH1P58417 271 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 KRT83P78385 493 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 ILKQ13418 452 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 EIF4EBP2Q13542 120 aaPredicted RBP23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 ARHGAP44Q17R89 818 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 SETMARQ53H47 684 aaPredicted RBP23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 OR6B2Q6IFH4 312 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 FBXL22Q6P050 247 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 TRIM65Q6PJ69 517 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 GBP6Q6ZN66 633 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 C11orf57Q6ZUT1 292 aaPredicted RBP23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 MARCH9Q86YJ5 346 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 LRIG1Q96JA1 1093 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 SLC2A13Q96QE2 648 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 CRACR2AQ9BSW2 395 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 RRN3Q9NYV6 651 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 VPS28Q9UK41 221 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 WDFY3Q8IZQ1 3526 aa23.74■■□□□ 1.39
SMARCD1-209ENST00000550477 BAHCC1Q9P281 2608 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 MCF2LO15068 1137 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 KRT9P35527 623 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 AUHQ13825 339 aaKnown RBP23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 DLG2Q15700 870 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 FRS2Q8WU20 508 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 FEM1AQ9BSK4 669 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 PCDHGC3Q9UN70 934 aa23.73■■□□□ 1.39
SMARCD1-209ENST00000550477 A0A087WV48 116 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 PRAMEF26H0Y7S4 382 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 PLK4O00444 970 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 PLRG1O43660 514 aaKnown RBP23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 ATP9BO43861 1147 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 RNGTTO60942 597 aaKnown RBP23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 DRD3P35462 400 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 NME3Q13232 169 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 TAF5Q15542 800 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 LRRC69Q6ZNQ3 347 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 TRIM69Q86WT6 500 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 CIR1Q86X95 450 aaPredicted RBP23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 CPXM1Q96SM3 734 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 MUC3BQ9H195 1237 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 DYRK4Q9NR20 520 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 APEX2Q9UBZ4 518 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 VANGL2Q9ULK5 521 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 PAXBP1Q9Y5B6 917 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 AK5Q9Y6K8 562 aa23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 DSPP15924 2871 aaKnown RBP23.72■■□□□ 1.39
SMARCD1-209ENST00000550477 RTN2O75298 545 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 VAV1P15498 845 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 CKMT2P17540 419 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 MAT2AP31153 395 aaKnown RBP23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 ABCG1P45844 678 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 CDH4P55283 916 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 PPP2CBP62714 309 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 PPP2CAP67775 309 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 PITX1P78337 314 aaPredicted RBP23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 DNAJC3Q13217 504 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 SHBQ15464 509 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 EXOC3L4Q17RC7 722 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 ACBD5Q5T8D3 534 aaPredicted RBP23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 CXorf57Q6NSI4 855 aaKnown RBP23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 ZDHHC17Q8IUH5 632 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 PIP4K2CQ8TBX8 421 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 KLHDC7BQ96G42 594 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 C2orf49Q9BVC5 232 aaPredicted RBP23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 WDCPQ9H6R7 721 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 PREBQ9HCU5 417 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms