RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TRIM62Q9BVG3 475 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 IRX2Q9BZI1 471 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 PCED1AQ9H1Q7 454 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 TM9SF3Q9HD45 589 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 PCOLCE2Q9UKZ9 415 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 INTS6Q9UL03 887 aaKnown RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 NCKAP1Q9Y2A7 1128 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 MSRB2Q9Y3D2 182 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 GON4LQ3T8J9 2241 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 A0A1W2PP55 124 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 GOLGA8CPA6NN73 597 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 MID1O15344 667 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 MOCS3O95396 460 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 TRUB2O95900 331 aaKnown RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 GZMAP12544 262 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 UNGP13051 313 aaPredicted RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 TACR2P21452 398 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 PSMD8P48556 350 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 NOMO3P69849 1222 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 CCZ1BP86790 482 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 ZBTB16Q05516 673 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 PDCLQ13371 301 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 SLC18A3Q16572 532 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 KIF19Q2TAC6 998 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 HNRNPA1L2Q32P51 320 aaKnown RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 RAB44Q7Z6P3 723 aaPredicted RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 VPS36Q86VN1 386 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 MMAAQ8IVH4 418 aaKnown RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 TMEM35BQ8NCS4 154 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 STK32AQ8WU08 396 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 LMLNQ96KR4 655 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 MRGPRX3Q96LB0 322 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 CCDC42Q96M95 316 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 SLC4A5Q9BY07 1137 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 RSPH9Q9H1X1 276 aaPredicted RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 PABPC3Q9H361 631 aaKnown RBP13.83□□□□□ -0.2
NUP188-211ENST00000550219 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 SGK2Q9HBY8 427 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 FBXL12Q9NXK8 326 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 SERGEFQ9UGK8 458 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 ADAMTS1Q9UHI8 967 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 ERVW-1Q9UQF0 538 aa13.83□□□□□ -0.2
NUP188-211ENST00000550219 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 A0A087X0T9 212 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 SOWAHDA6NJG2 315 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 TTC34A8MYJ7 566 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 F5H5T6 163 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 KCNK3O14649 394 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 GRAP2O75791 330 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 RNASEH2AO75792 299 aaKnown RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 LCA5LO95447 670 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 FAM228BP0C875 321 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 PDGFRAP16234 1089 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 STK19P49842 368 aaPredicted RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 IL9RQ01113 521 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 CENPCQ03188 943 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 TAF5Q15542 800 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 CST6Q15828 149 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 RAD9BQ6WBX8 426 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 APCDD1Q8J025 514 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 ATP6V0D2Q8N8Y2 350 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 C1orf216Q8TAB5 229 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 RNF34Q969K3 372 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 BTN2A3PQ96KV6 586 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 RPL10LQ96L21 214 aaKnown RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 APOBEC2Q9Y235 224 aaKnown RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 ANKRD6Q9Y2G4 727 aa13.82□□□□□ -0.2
NUP188-211ENST00000550219 EPN1Q9Y6I3 576 aaPredicted RBP13.82□□□□□ -0.2
NUP188-211ENST00000550219 ZFHX4Q86UP3 3567 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 FRYQ5TBA9 3013 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 EDDM13A0A1B0GTR0 161 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 FAM170AA1A519 330 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 SRRM3A6NNA2 597 aaPredicted RBP13.81□□□□□ -0.2
NUP188-211ENST00000550219 FLRT2O43155 660 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 PTMAP06454 111 aaKnown RBP13.81□□□□□ -0.2
NUP188-211ENST00000550219 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 CD27P26842 260 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 GGCXP38435 758 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 GRIA4P48058 902 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 CCT8P50990 548 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 YWHAZP63104 245 aaKnown RBP13.81□□□□□ -0.2
NUP188-211ENST00000550219 CCDC157Q569K6 752 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 ACAD10Q6JQN1 1059 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 PPP1R2P3Q6NXS1 205 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 NCEH1Q6PIU2 408 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 TMEM110Q86TL2 294 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 PHF13Q86YI8 300 aaPredicted RBP13.81□□□□□ -0.2
NUP188-211ENST00000550219 DEFB106AQ8N104 65 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
NUP188-211ENST00000550219 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms