RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ZNF33AQ06730 810 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 PUM1Q14671 1186 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 PEAR1Q5VY43 1037 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 ERMP1Q7Z2K6 904 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 RABEPKQ7Z6M1 372 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 DEFB119Q8N690 84 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 FOXJ1Q92949 421 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 NTAN1Q96AB6 310 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 TRIM11Q96F44 468 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 C2orf49Q9BVC5 232 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 XPO4Q9C0E2 1151 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 PARVAQ9NVD7 372 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 WSB2Q9NYS7 404 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 PPARGC1AQ9UBK2 798 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 OR12D3Q9UGF7 316 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 SLCO3A1Q9UIG8 710 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 OR51B4Q9Y5P0 310 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 BZW2Q9Y6E2 419 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 TP53BP1Q12888 1972 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 PCDH15Q96QU1 1955 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 MEI4A8MW99 385 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 DDX3XO00571 662 aaKnown RBP eCLIP17.69■□□□□ 0.422e-9■■■■□ 26.7
CHMP1A-208ENST00000550102 KHNYNO15037 678 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 CBFA2T2O43439 604 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 GDF9O60383 454 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 GYPCP04921 128 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 SKILP12757 684 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 VASPP50552 380 aaPredicted RBP17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 KRT83P78385 493 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 SCAPQ12770 1279 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 C9orf64Q5T6V5 341 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 MANEALQ5VSG8 457 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 FAM124AQ86V42 546 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 VPS36Q86VN1 386 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 SLC41A1Q8IVJ1 513 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 CCDC185Q8N715 623 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 DCAF4L2Q8NA75 395 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 EDEM2Q9BV94 578 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 GPR174Q9BXC1 333 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 OSBPL2Q9H1P3 480 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 EVLQ9UI08 416 aaPredicted RBP17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 PILRBQ9UKJ0 227 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 CAPN11Q9UMQ6 739 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 SCML1Q9UN30 329 aa17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 LUC7L2Q9Y383 392 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-208ENST00000550102 LNP1A1A4G5 178 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 RTN2O75298 545 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 FTLP02792 175 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 SERPING1P05155 500 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 LIMK1P53667 647 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 MAMLD1Q13495 774 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 ELAVL3Q14576 367 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 NFKBIBQ15653 356 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 CST6Q15828 149 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 EFHC2Q5JST6 749 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 SYCP2LQ5T4T6 812 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 ARTNQ5T4W7 220 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 PLEKHA7Q6IQ23 1121 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 ZNF783Q6ZMS7 281 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 CADM4Q8NFZ8 388 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 CPLX3Q8WVH0 158 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 ZNF653Q96CK0 615 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 TBC1D31Q96DN5 1066 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 ZNF419Q96HQ0 510 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 RTKNQ9BST9 563 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 PCED1AQ9H1Q7 454 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 ZNF212Q9UDV6 495 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 VPS51Q9UID3 782 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 HS3ST2Q9Y278 367 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 SCINQ9Y6U3 715 aa17.68■□□□□ 0.42
CHMP1A-208ENST00000550102 CNOT1A5YKK6 2376 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 ILVBLA1L0T0 632 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 PATE3B3GLJ2 98 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SLC30A4O14863 429 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 ATP9BO43861 1147 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 ADH1BP00325 375 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 CFIP05156 583 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 PLEKP08567 350 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 MYBL1P10243 752 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 PSMD8P48556 350 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 AIF1P55008 147 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SFSWAPQ12872 951 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 TRIM61Q5EBN2 209 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 WDR45BQ5MNZ6 344 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 HGSNATQ68CP4 663 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 RWDD4Q6NW29 188 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SCYL2Q6P3W7 929 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 USP30Q70CQ3 517 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SLFN11Q7Z7L1 901 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 DSG4Q86SJ6 1040 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 DRC7Q8IY82 874 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 SH2D3CQ8N5H7 860 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 CEP76Q8TAP6 659 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 FRS2Q8WU20 508 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 PSMB7Q99436 277 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 RETREG1Q9H6L5 497 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 RXFP3Q9NSD7 469 aa17.67■□□□□ 0.42
CHMP1A-208ENST00000550102 TMEM74BQ9NUR3 256 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms