RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CAPN9O14815 690 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 PLRG1O43660 514 aaKnown RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 BRINP1O60477 761 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 RNGTTO60942 597 aaKnown RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 IGLV3-25P01717 112 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 GPD2P43304 727 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 ACADSBP45954 432 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 PSMD8P48556 350 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 FMO5P49326 533 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 TLE3Q04726 772 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 LRMPQ12912 555 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 STAT4Q14765 748 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D25Q3MII6 688 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 ZNF658Q5TYW1 1059 aaPredicted RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 FAM46CQ5VWP2 391 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 SYPL2Q5VXT5 272 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 DSG4Q86SJ6 1040 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 ZNF605Q86T29 641 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 TRIM69Q86WT6 500 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 LGI2Q8N0V4 545 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC25A45Q8N413 288 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 ZNF843Q8N446 348 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 LMO3Q8TAP4 145 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 WBP1Q96G27 269 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 CCDC34Q96HJ3 373 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 NT5C1BQ96P26 610 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 GSDMAQ96QA5 445 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 TSG101Q99816 390 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 PRMT1Q99873 361 aaKnown RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 GTPBP4Q9BZE4 634 aaKnown RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 MIS12Q9H081 205 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 METTL14Q9HCE5 456 aaKnown RBP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 RMND1Q9NWS8 449 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 TJP2Q9UDY2 1190 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 PPM1HQ9ULR3 514 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 CNTN6Q9UQ52 1028 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 CEP83Q9Y592 693 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 KCNU1A8MYU2 1149 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 M0QYV0 167 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 TRIM38O00635 465 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 MCF2LO15068 1137 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ALOX15BO15296 676 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 P4HA2O15460 535 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ATP9BO43861 1147 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 MT-CO3P00414 261 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 APOEP02649 317 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 PLA2G2AP14555 144 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 TACR2P21452 398 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 BRD2P25440 801 aaKnown RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 STK19P49842 368 aaPredicted RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 PMS1P54277 932 aaKnown RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 PPP2CBP62714 309 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 YWHAZP63104 245 aaKnown RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 PPP2CAP67775 309 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 NUCB2P80303 420 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 LRRC63Q05C16 580 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 MEA1Q16626 185 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 NEK5Q6P3R8 708 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 TMEM110Q86TL2 294 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ERICH1Q86X53 443 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 HSCBQ8IWL3 235 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 SPATA20Q8TB22 786 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ERCC4Q92889 916 aaPredicted RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ALG14Q96F25 216 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 KLHDC7BQ96G42 594 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 SCAND2PQ9GZW5 306 aaPredicted RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 GOLPH3LQ9H4A5 285 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 THAP9Q9H5L6 903 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 KLHL11Q9NVR0 708 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC12A6Q9UHW9 1150 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 XPO7Q9UIA9 1087 aaKnown RBP10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 SARDHQ9UL12 918 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 ZDHHC9Q9Y397 364 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 KALRNO60229 2985 aa10.15□□□□□ -0.78
TRAFD1-207ENST00000550051 TDRD6O60522 2096 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 SIGLEC6O43699 453 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 RTN2O75298 545 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 DXOO77932 396 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 TRUB2O95900 331 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 GIMD1P0DJR0 217 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 SLC2A3P11169 496 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 VAV1P15498 845 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 DGKAP23743 735 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 METAP1P53582 386 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 GCNT1Q02742 428 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 CETN1Q12798 172 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 MTA1Q13330 715 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 SETMARQ53H47 684 aaPredicted RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 TTC39BQ5VTQ0 682 aaPredicted RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 AGBL4Q5VU57 503 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 CDCP2Q5VXM1 449 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 RAP1GAP2Q684P5 730 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 PCSK4Q6UW60 755 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 TAC4Q86UU9 113 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 SPACA3Q8IXA5 215 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms