RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	ATPAF2	Q8N5M1	289 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	ALLC	Q8N6M5	410 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	OR52K2	Q8NGK3	314 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	TFB1M	Q8WVM0	346 aa	Known RBP	12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	HDAC11	Q96DB2	347 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	HMCES	Q96FZ2	354 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	CCDC114	Q96M63	670 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	TSGA13	Q96PP4	275 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	LGMN	Q99538	433 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	PHF7	Q9BWX1	381 aa	Predicted RBP	12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	MAGEH1	Q9H213	219 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	PLK2	Q9NYY3	685 aa		12.53	□□□□□ -0.4
ERBB3-208	ENST00000549205	COL4A2	P08572	1712 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	C2CD4D	B7Z1M9	353 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	CHAD	O15335	359 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	HOXC11	O43248	304 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	RAD51C	O43502	376 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	MAFK	O60675	156 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ECEL1	O95672	775 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ADH5	P11766	374 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	TYR	P14679	529 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ARSA	P15289	507 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	SP100	P23497	879 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ACVRL1	P37023	503 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ETFB	P38117	255 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	OXCT1	P55809	520 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	AP1B1	Q10567	949 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	SERINC3	Q13530	473 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	GRM2	Q14416	872 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ANO4	Q32M45	955 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	GLE1	Q53GS7	698 aa	Known RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	FSCB	Q5H9T9	825 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	RNF219	Q5W0B1	726 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCDC70	Q6NSX1	233 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	B4GALNT4	Q76KP1	1039 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	JAML	Q86YT9	394 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZNF557	Q8N988	423 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCNY	Q8ND76	341 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	OR7D4	Q8NG98	312 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	FIBIN	Q8TAL6	211 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	WFDC5	Q8TCV5	224 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	LRRN4	Q8WUT4	740 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	RSAD2	Q8WXG1	361 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ARHGEF2	Q92974	986 aa	Known RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	FATE1	Q969F0	183 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	RTP4	Q96DX8	246 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZFYVE19	Q96K21	471 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	TMEM121	Q9BTD3	319 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	LRRC1	Q9BTT6	524 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	EBF3	Q9H4W6	596 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	C10orf88	Q9H8K7	445 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	USP29	Q9HBJ7	922 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	HPS4	Q9NQG7	708 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	NUMBL	Q9Y6R0	609 aa		12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	TCF20	Q9UGU0	1960 aa	Known RBP	12.52	□□□□□ -0.41
ERBB3-208	ENST00000549205	TTC28	Q96AY4	2481 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205		A0A0D9SEW6	157 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	FAM187A	A6NFU0	413 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	SGK1	O00141	431 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	KCNN4	O15554	427 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	TTI1	O43156	1089 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	GAS8	O95995	478 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	VAV1	P15498	845 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCNC	P24863	283 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	RBL1	P28749	1068 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	STIP1	P31948	543 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	MRPS25	P82663	173 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	GAD2	Q05329	585 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	PUS10	Q3MIT2	529 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	HEATR6	Q6AI08	1181 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	ARHGAP36	Q6ZRI8	547 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	GSTA5	Q7RTV2	222 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCDC13	Q8IYE1	715 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	PLCD3	Q8N3E9	789 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	CPA6	Q8N4T0	437 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	FAM71D	Q8N9W8	422 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	MAFA	Q8NHW3	353 aa	Predicted RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	HTR3C	Q8WXA8	447 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	LMLN	Q96KR4	655 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	FERMT1	Q9BQL6	677 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	FEM1A	Q9BSK4	669 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	RPP25	Q9BUL9	199 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRMT61B	Q9BVS5	477 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	SLC2A11	Q9BYW1	496 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	MUC3B	Q9H195	1237 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	ECT2	Q9H8V3	914 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	IPO11	Q9UI26	975 aa	Known RBP	12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	CLEC4E	Q9ULY5	219 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	FAM50B	Q9Y247	325 aa		12.51	□□□□□ -0.41
ERBB3-208	ENST00000549205	RNF103	O00237	685 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	MTSS1	O43312	755 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	CACNG3	O60359	315 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	PRAMEF11	O60813	436 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	STK10	O94804	968 aa	Known RBP	12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	MZF1	P28698	734 aa	Predicted RBP	12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	GDI1	P31150	447 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms