RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 NAPEPLDQ6IQ20 393 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 MARCH9Q86YJ5 346 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 GATAD2AQ86YP4 633 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 CCAR2Q8N163 923 aaKnown RBP13.25□□□□□ -0.29
PTCH1-218ENST00000548945 FRS2Q8WU20 508 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 TSC1Q92574 1164 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 NXPE2Q96DL1 559 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 CNDP2Q96KP4 475 aaKnown RBP13.25□□□□□ -0.29
PTCH1-218ENST00000548945 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-218ENST00000548945 ASNSD1Q9NWL6 643 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 CYTH4Q9UIA0 394 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 MGAQ8IWI9 3026 aa13.25□□□□□ -0.29
PTCH1-218ENST00000548945 FLNBO75369 2602 aaKnown RBP13.25□□□□□ -0.29
PTCH1-218ENST00000548945 TDRD6O60522 2096 aaKnown RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 DOCK4Q8N1I0 1966 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 WNT9AO14904 365 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 PLRG1O43660 514 aaKnown RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 ATP9BO43861 1147 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 FGFR1OPO95684 399 aaKnown RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 BMP6P22004 513 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 GNA15P30679 374 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 CCR1P32246 355 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 ACADVLP49748 655 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 PDCLQ13371 301 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 MORC3Q14149 939 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 CCDC157Q569K6 752 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 PRAMEF14Q5SWL7 426 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 SFMBT2Q5VUG0 894 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 ISM2Q6H9L7 571 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TRIM69Q86WT6 500 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-218ENST00000548945 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 SLC2A13Q96QE2 648 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 ARHGAP20Q9P2F6 1191 aa13.24□□□□□ -0.29
PTCH1-218ENST00000548945 TRPM6Q9BX84 2022 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 THAP12O43422 761 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 HSF2BPO75031 334 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 JUPP14923 745 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 PPP2CBP62714 309 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 PPP2CAP67775 309 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-218ENST00000548945 PAK1Q13153 545 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 EFHC1Q5JVL4 640 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 FBXL22Q6P050 247 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-218ENST00000548945 KANSL1Q7Z3B3 1105 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 EID2Q8N6I1 236 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 ALG14Q96F25 216 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 FEM1AQ9BSK4 669 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 NRSN2Q9GZP1 204 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 FAM204AQ9H8W3 233 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 SLC25A13Q9UJS0 675 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 PPM1HQ9ULR3 514 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 CTNND2Q9UQB3 1225 aa13.23□□□□□ -0.29
PTCH1-218ENST00000548945 ATMQ13315 3056 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 PLK4O00444 970 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 MCF2LO15068 1137 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
PTCH1-218ENST00000548945 CLDN11O75508 207 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 VAV1P15498 845 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 ABCG1P45844 678 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 SNX16P57768 344 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 RTP5Q14D33 572 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 TAF5Q15542 800 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 SETMARQ53H47 684 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-218ENST00000548945 FBXL19Q6PCT2 694 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 TRIM65Q6PJ69 517 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 CIR1Q86X95 450 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-218ENST00000548945 DEFB106AQ8N104 65 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 RNF34Q969K3 372 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 RPRD1AQ96P16 312 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-218ENST00000548945 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
PTCH1-218ENST00000548945 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 TMEM51Q9NW97 253 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 PCDHGC3Q9UN70 934 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 TBC1D30Q9Y2I9 924 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 OR51B4Q9Y5P0 310 aa13.22□□□□□ -0.29
PTCH1-218ENST00000548945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-218ENST00000548945 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.29
PTCH1-218ENST00000548945 CBX4O00257 560 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms