RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 THAP12O43422 761 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 SIGLEC6O43699 453 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 GRAP2O75791 330 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 SMC2O95347 1197 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 ACADSBP45954 432 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 RXRGP48443 463 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 INSM1Q01101 510 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 CENPCQ03188 943 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 LRRC63Q05C16 580 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 CETN1Q12798 172 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 DLG2Q15700 870 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 CREBRFQ8IUR6 639 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 OR52K2Q8NGK3 314 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 FRS2Q8WU20 508 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 OR8D1Q8WZ84 308 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 BAP1Q92560 729 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 FGF11Q92914 225 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 KLHDC7BQ96G42 594 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 BTN2A3PQ96KV6 586 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 KREMEN1Q96MU8 473 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 NRSN2Q9GZP1 204 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 FAM204AQ9H8W3 233 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 UBE2TQ9NPD8 197 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 FZD3Q9NPG1 666 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 SLC25A13Q9UJS0 675 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 CLCA2Q9UQC9 943 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 PTPRQQ9UMZ3 2332 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 IGSF10Q6WRI0 2623 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 FAM170AA1A519 330 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 KCNU1A8MYU2 1149 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 PSMA7O14818 248 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 PLRG1O43660 514 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 RNGTTO60942 597 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 C1QL1O75973 258 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 CDK4P11802 303 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 PRLRP16471 622 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 USP8P40818 1118 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 IRAK1P51617 712 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 STX17P56962 302 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 YWHAZP63104 245 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 CXADRP78310 365 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 NME3Q13232 169 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 NNTQ13423 1086 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 STIM1Q13586 685 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 RTP5Q14D33 572 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 ZNF542PQ5EBM4 170 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 Q6ZVU0 165 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 KANSL1Q7Z3B3 1105 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 DEFB106AQ8N104 65 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 SLC25A45Q8N413 288 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 OXR1Q8N573 874 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 ZNF606Q8WXB4 792 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 RPRD1AQ96P16 312 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 SPAG5Q96R06 1193 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 SIK2Q9H0K1 926 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 POPDC2Q9HBU9 364 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 DDIT4Q9NX09 232 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 VANGL2Q9ULK5 521 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 PCDHB1Q9Y5F3 818 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 RP1P56715 2156 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 DOCK4Q8N1I0 1966 aa12.3□□□□□ -0.44
TRAFD1-205ENST00000548277 SMG1Q96Q15 3661 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 ATXN7O15265 892 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 LATO43561 262 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 MT-CO3P00414 261 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 THEGLP0DJG4 465 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 SULT2A1Q06520 285 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 ZNF177Q13360 481 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 SLC12A1Q13621 1099 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 ARHGAP44Q17R89 818 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 COBLL1Q53SF7 1204 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 RABGAP1LQ5R372 815 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 AGBL4Q5VU57 503 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 FAM46CQ5VWP2 391 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 CXorf57Q6NSI4 855 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 GJB7Q6PEY0 223 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 GPR155Q7Z3F1 870 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 DSG4Q86SJ6 1040 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 PASD1Q8IV76 773 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 CEP63Q96MT8 703 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 MED15Q96RN5 788 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 PRMT1Q99873 361 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 FEM1AQ9BSK4 669 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 CALN1Q9BXU9 219 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 SLC4A5Q9BY07 1137 aa12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 INTS2Q9H0H0 1204 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-205ENST00000548277 THAP9Q9H5L6 903 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms