RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RUNX3Q13761 415 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 PREPLQ4J6C6 727 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 HEATR6Q6AI08 1181 aaKnown RBP16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 C8orf74Q6P047 294 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 GSTA5Q7RTV2 222 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 ZNF354CQ86Y25 554 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 ARHGAP12Q8IWW6 846 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 CCHCR1Q8TD31 782 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 NSMCE1Q8WV22 266 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 FATE1Q969F0 183 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 SLC39A8Q9C0K1 460 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 MUC3BQ9H195 1237 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 ECT2Q9H8V3 914 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 NDFIP2Q9NV92 336 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 HAUS2Q9NVX0 235 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 NUP205Q92621 2012 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 FAM187AA6NFU0 413 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 ZSCAN5CA6NGD5 496 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 CACNG3O60359 315 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 SP100P23497 879 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 GDI1P31150 447 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 PAPOLAP51003 745 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 AP1B1Q10567 949 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 SERINC3Q13530 473 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 GRM2Q14416 872 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 DMC1Q14565 340 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 PRKD1Q15139 912 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 CXorf57Q6NSI4 855 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 C4orf22Q6V702 233 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 ARHGEF2Q92974 986 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 BHMTQ93088 406 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 ASIC4Q96FT7 647 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 VAT1Q99536 393 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 FAM118BQ9BPY3 351 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 C2orf49Q9BVC5 232 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 PLA2G2FQ9BZM2 168 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 EBF3Q9H4W6 596 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 NOL6Q9H6R4 1146 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 PLK2Q9NYY3 685 aa16.21■□□□□ 0.19
TRAFD1-203ENST00000547063 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 CXorf51AA0A1B0GTR3 108 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 SGK1O00141 431 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 MAP3K6O95382 1288 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ARSAP15289 507 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 PLK1P53350 603 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 GEMIN4P57678 1058 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 IL10RBQ08334 325 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ITPRIPL2Q3MIP1 535 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 TMCO4Q5TGY1 634 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 TRIM68Q6AZZ1 485 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 IL31Q6EBC2 164 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 TTC27Q6P3X3 843 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ALLCQ8N6M5 410 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 CCDC89Q8N998 374 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 HTR3CQ8WXA8 447 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 EXOC4Q96A65 974 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ACDQ96AP0 544 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 HMCESQ96FZ2 354 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ZNF599Q96NL3 588 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 LGMNQ99538 433 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 FEM1AQ9BSK4 669 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 TMEM121Q9BTD3 319 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 SP110Q9HB58 689 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 ATP13A1Q9HD20 1204 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 TRPV5Q9NQA5 729 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 PRKAG3Q9UGI9 489 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 IPO11Q9UI26 975 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 VPS28Q9UK41 221 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 FBXO10Q9UK96 956 aa16.2■□□□□ 0.18
TRAFD1-203ENST00000547063 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 MATN3O15232 486 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 KCNN4O15554 427 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 KDELR3O43731 214 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 MAFKO60675 156 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 NEBLO76041 1014 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 EIF2DP41214 584 aaKnown RBP16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 KCNJ1P48048 391 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 SULT2A1Q06520 285 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 PPP1R7Q15435 360 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 METTL3Q86U44 580 aaKnown RBP16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 BBS5Q8N3I7 341 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 DCAF4L2Q8NA75 395 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 WFIKKN2Q8TEU8 576 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 UBXN4Q92575 508 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 RTP4Q96DX8 246 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 SPON2Q9BUD6 331 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 ACE2Q9BYF1 805 aaPredicted RBP16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 RAB17Q9H0T7 212 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 KCNK12Q9HB15 430 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 HPS4Q9NQG7 708 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 LIMD1Q9UGP4 676 aa16.19■□□□□ 0.18
TRAFD1-203ENST00000547063 A0A0D9SEW6 157 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 NDC80O14777 642 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 PRAMEF11O60813 436 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms