RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PIPSLA2A3N6 862 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 GUCA1CO95843 209 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 GRIA3P42263 894 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 RGS7P49802 495 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 PKNOX1P55347 436 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 LZTR1Q8N653 840 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 ENDOVQ8N8Q3 282 aaKnown RBP13.02□□□□□ -0.33
PTCH1-212ENST00000546744 OR56A4Q8NGH8 313 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 HTR3CQ8WXA8 447 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 CCDC167Q9P0B6 97 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 RPS6KA6Q9UK32 745 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 HAT1O14929 419 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 MYL12BO14950 172 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 GPIP06744 558 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 C6orf222P0C671 652 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-212ENST00000546744 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 BCAT1P54687 386 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 CDC16Q13042 620 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 ATF7IP2Q5U623 682 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 DPP9Q86TI2 863 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 TMEM132CQ8N3T6 1108 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 WDR36Q8NI36 951 aaKnown RBP13.01□□□□□ -0.33
PTCH1-212ENST00000546744 ZNF606Q8WXB4 792 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 CBWD1Q9BRT8 395 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 CXorf21Q9HAI6 301 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 AASDHPPTQ9NRN7 309 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 SLC38A7Q9NVC3 462 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 WWOXQ9NZC7 414 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 MAGEL2Q9UJ55 1249 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 CDH22Q9UJ99 828 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 GSSP48637 474 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 PSEN1P49768 467 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 NFIL3Q16649 462 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 KHDC1Q4VXA5 237 aaKnown RBP13.01□□□□□ -0.33
PTCH1-212ENST00000546744 EPC2Q52LR7 807 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 C2CD6Q53TS8 623 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 C2orf81A6NN90 581 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 H6PDO95479 791 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 ERBB2P04626 1255 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 TCF3P15923 654 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 CDK9P50750 372 aaKnown RBP13.01□□□□□ -0.33
PTCH1-212ENST00000546744 PRKCEQ02156 737 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 HIST2H2ACQ16777 129 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-212ENST00000546744 GOLGA7BQ2TAP0 167 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 ZNF57Q68EA5 555 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-212ENST00000546744 HIST2H2AA3Q6FI13 130 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 ATG14Q6ZNE5 492 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 RAB43Q86YS6 212 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 FAM172AQ8WUF8 416 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 SHC3Q92529 594 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 KLHL32Q96NJ5 620 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 NMUR2Q9GZQ4 415 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 IL22Q9GZX6 179 aa13.01□□□□□ -0.33
PTCH1-212ENST00000546744 PEX11AO75192 247 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 AVILO75366 819 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 CRHR1P34998 444 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 SNAP25P60880 206 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 CSNK2BP67870 215 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 NR6A1Q15406 480 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 FAM187BQ17R55 369 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 DCAF6Q58WW2 860 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 NIPA1Q7RTP0 329 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 SLC44A1Q8WWI5 657 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 EPB41L4BQ9H329 900 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 RAVER2Q9HCJ3 691 aaKnown RBP13□□□□□ -0.33
PTCH1-212ENST00000546744 A0A0U1RQJ8 604 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 CAPN8A6NHC0 703 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 PRR5-ARHGAP8B1AHC4 643 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 ZNF682O95780 498 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 PRKAR1AP10644 381 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 COL6A2P12110 1019 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 NNMTP40261 264 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
PTCH1-212ENST00000546744 POLD2P49005 469 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 ARHGAP8P85298 464 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
PTCH1-212ENST00000546744 MTM1Q13496 603 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 C5orf22Q49AR2 442 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
PTCH1-212ENST00000546744 SMARCAD1Q9H4L7 1026 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 FBXO6Q9NRD1 293 aaPredicted RBP13□□□□□ -0.33
PTCH1-212ENST00000546744 TAS2R1Q9NYW7 299 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 UBP1Q9NZI7 540 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 ATP6V1HQ9UI12 483 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 CLRN2A0PK11 232 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 M0QX08 132 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 SERPINA1P01009 418 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 GLRA2P23416 452 aa13□□□□□ -0.33
PTCH1-212ENST00000546744 GRK3P35626 688 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms