RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 SPANXN3Q5MJ09 141 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 PMF1Q6P1K2 205 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
CHERP-203ENST00000546361 JADE3Q92613 823 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 ATP13A3Q9H7F0 1226 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 BRD9Q9H8M2 597 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 CAPN10Q9HC96 672 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 GMIPQ9P107 970 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 SPACA6W5XKT8 324 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 COL1A1P02452 1464 aaPredicted RBP12.05□□□□□ -0.48
CHERP-203ENST00000546361 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
CHERP-203ENST00000546361 ERBB2P04626 1255 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 GPC1P35052 558 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 MFSD4BQ5TF39 518 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 ALG3Q92685 438 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 PPP1R16AQ96I34 528 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 FAR2Q96K12 515 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 SNX27Q96L92 541 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 CCDC90BQ9GZT6 254 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 ASB8Q9H765 288 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 CFAP97Q9P2B7 532 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 MORF4L1Q9UBU8 362 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 PKD1L3Q7Z443 1732 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 FAM153BP0C7A2 387 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 H2AFXP16104 143 aaPredicted RBP12.05□□□□□ -0.48
CHERP-203ENST00000546361 ABCG1P45844 678 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 INPP5AQ14642 412 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 FAM153CQ494X1 144 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 SEL1L3Q68CR1 1132 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 DTX3LQ8TDB6 740 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 PCED1BQ96HM7 432 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 ECSITQ9BQ95 431 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 NINJ2Q9NZG7 142 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 HEY2Q9UBP5 337 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 Q9Y3F1 56 aa12.05□□□□□ -0.48
CHERP-203ENST00000546361 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
CHERP-203ENST00000546361 GNG14A0A1W2PPG7 69 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 LIASO43766 372 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 PBX3P40426 434 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 HSPA14Q0VDF9 509 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 MARK2Q7KZI7 788 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 RASAL3Q86YV0 1011 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 BTN2A3PQ96KV6 586 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 ACOX2Q99424 681 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 TMBIM4Q9HC24 238 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 DNAJC16Q9Y2G8 782 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 hCG_1818297A0A087WSY0 165 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 SYN3O14994 580 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 CCNT2O60583 730 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 ERVK-10P10266 1014 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 ABL2P42684 1182 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 HPCAP84074 193 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 CDC16Q13042 620 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 N4BP2L1Q5TBK1 243 aaPredicted RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 THEGQ9P2T0 379 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 DEC1Q9P2X7 70 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 WARS2Q9UGM6 360 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 MGAT4DA6NG13 374 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 C1QTNF3-AMACRE9PGA6 284 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 FMO4P31512 558 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 MAGEA9P43362 315 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 PRIM2P49643 509 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 PLK1P53350 603 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 NR6A1Q15406 480 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 KBTBD12Q3ZCT8 623 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 PCID2Q5JVF3 399 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 GRTP1Q5TC63 336 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 ANKS6Q68DC2 871 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 SAPCD2Q86UD0 394 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 FBXO39Q8N4B4 442 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 CAVIN3Q969G5 261 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 PAWRQ96IZ0 340 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 CHCHD3Q9NX63 227 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 SELENONQ9NZV5 590 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 KRT6AP02538 564 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 KRT6BP04259 564 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 KRT16P08779 473 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 KRT6CP48668 564 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 INPP1P49441 399 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 SPIRE1Q08AE8 756 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 XRCC4Q13426 336 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 ECHDC2Q86YB7 292 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 SLC44A2Q8IWA5 706 aaPredicted RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 ZCCHC9Q8N567 271 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 SLC4A11Q8NBS3 891 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 DQX1Q8TE96 717 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 KLHL5Q96PQ7 755 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms