RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 GRIA2P42262 883 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 KIR2DL1P43626 348 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SEC13P55735 322 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 GNA12Q03113 381 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 PTPRNQ16849 979 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 KAZNQ674X7 775 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 VSIG1Q86XK7 387 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 CYB5D2Q8WUJ1 264 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 ARHGEF2Q92974 986 aaKnown RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 TRIM44Q96DX7 344 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 MYO19Q96H55 970 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 ACOX2Q99424 681 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 C2orf42Q9NWW7 574 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 KIAA1522Q9P206 1035 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SHROOM3Q8TF72 1996 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 TBC1D3BA6NDS4 549 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF487B1APH4 448 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 KIF5CO60282 957 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 ZMPSTE24O75844 475 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 CD160O95971 181 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 PECAM1P16284 738 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-217ENST00000545738 STK19P49842 368 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF135P52742 658 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-217ENST00000545738 DYNLT1P63172 113 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 UBXN2BQ14CS0 331 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 RPS6KA1Q15418 735 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 TFDP3Q5H9I0 405 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 C6orf118Q5T5N4 469 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 EGFLAMQ63HQ2 1017 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 MBLAC2Q68D91 279 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 CCDC50Q8IVM0 306 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 MAP7D3Q8IWC1 876 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 MSANTD3Q96H12 275 aa16.69■□□□□ 0.26
LIMS2-217ENST00000545738 ACE2Q9BYF1 805 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-217ENST00000545738 FAM170BA6NMN3 283 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.68■□□□□ 0.26
LIMS2-217ENST00000545738 WASH3PC4AMC7 463 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 RASA4BC9J798 803 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 RASA4O43374 803 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 RAMP2O60895 175 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 MT-CO1P00395 513 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 APODP05090 189 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 PLK1P53350 603 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 GNG11P61952 73 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 ARF5P84085 180 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 AMPD2Q01433 879 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 PAFAH1B3Q15102 231 aaKnown RBP16.68■□□□□ 0.26
LIMS2-217ENST00000545738 GLIPR1L2Q4G1C9 344 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 TMCO3Q6UWJ1 677 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 LEKR1Q6ZMV7 388 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 NYAP1Q6ZVC0 841 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 AHI1Q8N157 1196 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 UBL4BQ8N7F7 174 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 PJA1Q8NG27 643 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 RBM41Q96IZ5 413 aaKnown RBP16.68■□□□□ 0.26
LIMS2-217ENST00000545738 RPL10LQ96L21 214 aaKnown RBP16.68■□□□□ 0.26
LIMS2-217ENST00000545738 MRGPRX3Q96LB0 322 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 MUC3BQ9H195 1237 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 ELOVL2Q9NXB9 296 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 DTLQ9NZJ0 730 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 VPS51Q9UID3 782 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 JRKLQ9Y4A0 524 aa16.68■□□□□ 0.26
LIMS2-217ENST00000545738 TMEM221A6NGB7 291 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 M0R296 226 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 TNFRSF10AO00220 468 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 KCNK3O14649 394 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 CST8O60676 142 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 RNF40O75150 1001 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 ALADP13716 330 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 GRSF1Q12849 480 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIMS2-217ENST00000545738 POLD3Q15054 466 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-217ENST00000545738 PPP2R5EQ16537 467 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 LINGO4Q6UY18 593 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 B4GALNT4Q76KP1 1039 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 RFX6Q8HWS3 928 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 FLCNQ8NFG4 579 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 TTC17Q96AE7 1141 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF419Q96HQ0 510 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-217ENST00000545738 OSBPL8Q9BZF1 889 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 CIPCQ9C0C6 399 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 VPS28Q9UK41 221 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 J3KR12 359 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 K7ERQ8 282 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
LIMS2-217ENST00000545738 DRD1P21728 446 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 PTPN7P35236 360 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 PAPOLAP51003 745 aaKnown RBP16.67■□□□□ 0.26
LIMS2-217ENST00000545738 KLF1Q13351 362 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-217ENST00000545738 SERINC3Q13530 473 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 C2orf27AQ580R0 203 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF366Q8N895 744 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 HAUS1Q96CS2 278 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 FAM118BQ9BPY3 351 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 SPON2Q9BUD6 331 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms