RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KDM1BQ8NB78 822 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 FAM71BQ8TC56 605 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 ELP5Q8TE02 316 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 ARL15Q9NXU5 204 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 PKP3Q9Y446 797 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 PTGDR2Q9Y5Y4 395 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 TCRBV7S3A2A0A539 114 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 EME2A4GXA9 379 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 SPRY3O43610 288 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 HOXC6P09630 235 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 GYS1P13807 737 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 ARSBP15848 533 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 KLRC2P26717 231 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 TNFSF8P32971 234 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 RCAN1P53805 252 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 SPARCL1Q14515 664 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 HSP90AB2PQ58FF8 381 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 CAPRIN2Q6IMN6 1127 aaKnown RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 AAGABQ6PD74 315 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 KIAA1324Q6UXG2 1013 aaKnown RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 ANKS1BQ7Z6G8 1248 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 TMEM200AQ86VY9 491 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 CADM3Q8N126 398 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 CMASQ8NFW8 434 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 SPATA3Q8NHX4 192 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 FAM84BQ96KN1 310 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 POLDIP3Q9BY77 421 aaKnown RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 B3GNT4Q9C0J1 378 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 OBP2BQ9NPH6 170 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
SNHG1-224ENST00000545688 WNT16Q9UBV4 365 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 PCDHA10Q9Y5I2 948 aa5.17□□□□□ -1.58
SNHG1-224ENST00000545688 NCAPD3P42695 1498 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 GOLGA6L3A6NEY3 463 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 OR6C75A6NL08 312 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 I6L893 689 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-224ENST00000545688 PRC1O43663 620 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 FGF3P11487 239 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-224ENST00000545688 CHRNB2P17787 502 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 PCYT1AP49585 367 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 ENTPD1P49961 510 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 BTKQ06187 659 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 Q0VFX4 171 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 DCAF12L2Q5VW00 463 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 XRRA1Q6P2D8 792 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 RBM23Q86U06 439 aaKnown RBP5.16□□□□□ -1.58
SNHG1-224ENST00000545688 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 IGFN1Q86VF2 1251 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 FAM185AQ8N0U4 392 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 ENDOVQ8N8Q3 282 aaKnown RBP5.16□□□□□ -1.58
SNHG1-224ENST00000545688 RSC1A1Q92681 617 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 PHF21BQ96EK2 531 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 ACTR5Q9H9F9 607 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-224ENST00000545688 CD93Q9NPY3 652 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 ICKQ9UPZ9 632 aa5.16□□□□□ -1.58
SNHG1-224ENST00000545688 LGALS16A8MUM7 142 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 HEXIM1O94992 359 aaKnown RBP5.15□□□□□ -1.59
SNHG1-224ENST00000545688 PAPSS2O95340 614 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-224ENST00000545688 PRPH2P23942 346 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 TBX4P57082 545 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-224ENST00000545688 CRYZQ08257 329 aaKnown RBP5.15□□□□□ -1.59
SNHG1-224ENST00000545688 KEAP1Q14145 624 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 PTK2BQ14289 1009 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 NFATC4Q14934 902 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 OTUD1Q5VV17 481 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-224ENST00000545688 GGT6Q6P531 493 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 CAMK1DQ8IU85 385 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 LRRC57Q8N9N7 239 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 NPAS1Q99742 590 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 HDHD5Q9BXW7 423 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 SEZ6LQ9BYH1 1024 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 SEPSECSQ9HD40 501 aaKnown RBP5.15□□□□□ -1.59
SNHG1-224ENST00000545688 ARFGAP3Q9NP61 516 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 NLRC4Q9NPP4 1024 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 ZNF112Q9UJU3 913 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 FZD10Q9ULW2 581 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 SLC4A4Q9Y6R1 1079 aa5.15□□□□□ -1.59
SNHG1-224ENST00000545688 ERCC6Q03468 1493 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 ACOT8O14734 319 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 FFAR2O15552 330 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 HOXD3P31249 432 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-224ENST00000545688 CYP2J2P51589 502 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 TMPRSS3P57727 454 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 DSCR9P59020 149 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 ABATP80404 500 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 DUSP6Q16828 381 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 FNBP1LQ5T0N5 605 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 NADSYN1Q6IA69 706 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 Q6ZSV7 163 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 DPP10Q8N608 796 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 ELAC2Q9BQ52 826 aaKnown RBP5.14□□□□□ -1.59
SNHG1-224ENST00000545688 RTKNQ9BST9 563 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 HIPK3Q9H422 1215 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 PDE11AQ9HCR9 933 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 Q9N2J8 555 aa5.14□□□□□ -1.59
SNHG1-224ENST00000545688 CLEC18AA5D8T8 446 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 STMND1H3BQB6 276 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 GRM8O00222 908 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms