RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 HNRNPLP14866 589 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 HOXD9P28356 352 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 NTSR1P30989 418 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 RACK1P63244 317 aaKnown RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PDCLQ13371 301 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 COL9A2Q14055 689 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 KCNJ12Q14500 433 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PUM1Q14671 1186 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 E2F5Q15329 346 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 VWA3BQ502W6 1294 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 USP39Q53GS9 565 aaKnown RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 MIIPQ5JXC2 388 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 ADGRF1Q5T601 910 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 EMC10Q5UCC4 262 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PMS2CLQ68D20 193 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 GJB7Q6PEY0 223 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PRR23CQ6ZRP0 262 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 TOGARAM2Q6ZUX3 1019 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 ANKS1BQ7Z6G8 1248 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 CHPFQ8IZ52 775 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 NETO1Q8TDF5 533 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 CLEC4CQ8WTT0 213 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 ZNF606Q8WXB4 792 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 P2RY11Q96G91 374 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 SERPINB11Q96P15 392 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 GABRG3Q99928 467 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 TUBGCP2Q9BSJ2 902 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 SLC2A11Q9BYW1 496 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 TPSD1Q9BZJ3 242 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 MRPL18Q9H0U6 180 aaKnown RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 DUSP15Q9H1R2 295 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 NDST4Q9H3R1 872 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 ZDHHC4Q9NPG8 344 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 ST7Q9NRC1 585 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PLK2Q9NYY3 685 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 BCCIPQ9P287 314 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 SFMBT1Q9UHJ3 866 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 SPTBN2O15020 2390 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PLXNA2O75051 1894 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 A0A1W2PQF6 199 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 E5RJQ4 531 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 IRAK2O43187 625 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 PAPSS1O43252 624 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 MBD3O95983 291 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 FYNP06241 537 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 ZNF806P0C7X5 589 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 NCAM1P13591 858 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 TFE3P19532 575 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 GBP1P32455 592 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 MPLP40238 635 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 USP8P40818 1118 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 P2RY2P41231 377 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 SLC11A2P49281 568 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 APBA1Q02410 837 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 ENPP2Q13822 863 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 BYSLQ13895 437 aaKnown RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 ARHGAP44Q17R89 818 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 MPPE1Q53F39 396 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 TCP11X2Q5H9J9 407 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 MPP7Q5T2T1 576 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 SDE2Q6IQ49 451 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 DENND1BQ6P3S1 775 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 HDXQ7Z353 690 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 TMEM110Q86TL2 294 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 UNC45BQ8IWX7 931 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 ZNF557Q8N988 423 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 ENOX1Q8TC92 643 aaKnown RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 GPT2Q8TD30 523 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 DQX1Q8TE96 717 aaKnown RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 DDI1Q8WTU0 396 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 UCMAQ8WVF2 138 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 HMGB4Q8WW32 186 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 AZIN2Q96A70 460 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 FAM149B1Q96BN6 582 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 PIWIL1Q96J94 861 aaKnown RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 NOX5Q96PH1 765 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 MIS12Q9H081 205 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 LHX5Q9H2C1 402 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 CYP4F12Q9HCS2 524 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 CD248Q9HCU0 757 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 ACP6Q9NPH0 428 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 CYTH4Q9UIA0 394 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 DNAJC12Q9UKB3 198 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 AJAP1Q9UKB5 411 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 NFE2L3Q9Y4A8 694 aa7.97□□□□□ -1.13
SNHG1-223ENST00000545440 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.97□□□□□ -1.13
SNHG1-223ENST00000545440 DOCK9Q9BZ29 2069 aa7.96□□□□□ -1.13
SNHG1-223ENST00000545440 TYW5A2RUC4 315 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DCLK1O15075 740 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 HSF2BPO75031 334 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 IGLV3-25P01717 112 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 GLI1P08151 1106 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 GABRG2P18507 467 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 BCKDHBP21953 392 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 HLA-FP30511 346 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DNAJA1P31689 397 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DPP6P42658 865 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms