RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 CAMK1GQ96NX5 476 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TBCBQ99426 244 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 GPR174Q9BXC1 333 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 CIPCQ9C0C6 399 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 FAM204AQ9H8W3 233 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 ITM2CQ9NQX7 267 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 PARVAQ9NVD7 372 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 SUSD2Q9UGT4 822 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 HBS1LQ9Y450 684 aaKnown RBP12.88□□□□□ -0.35
ACTN1-206ENST00000544964 NEUROG3Q9Y4Z2 214 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 PCDHA13Q9Y5I0 950 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 SLCO1B1Q9Y6L6 691 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 PTPRBP23467 1997 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 MEI4A8MW99 385 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 M0QYT0 321 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 LATS1O95835 1130 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
ACTN1-206ENST00000544964 IGLV3-27P01718 113 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 CYP1A2P05177 515 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 SYPP08247 313 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 HLA-EP13747 358 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 GPD1P21695 349 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 BNC1Q01954 994 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 OGDHQ02218 1023 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-206ENST00000544964 PTPRNQ16849 979 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 WDR45BQ5MNZ6 344 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 OTUD1Q5VV17 481 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-206ENST00000544964 SERPINA13PQ6UXR4 307 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.87□□□□□ -0.35
ACTN1-206ENST00000544964 CADM4Q8NFZ8 388 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 WFDC5Q8TCV5 224 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-206ENST00000544964 SIPA1Q96FS4 1042 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 NPY6RQ99463 290 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 NUP85Q9BW27 656 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 TRIM7Q9C029 511 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 REXO2Q9Y3B8 237 aaKnown RBP12.87□□□□□ -0.35
ACTN1-206ENST00000544964 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 SCINQ9Y6U3 715 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 PLXNA2O75051 1894 aa12.87□□□□□ -0.35
ACTN1-206ENST00000544964 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 BAHCC1Q9P281 2608 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 C2CD4BA6NLJ0 364 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 SH3BP5O60239 455 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 SYNCRIPO60506 623 aaKnown RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 TSPAN3O60637 253 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 EPHX1P07099 455 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 GNSP15586 552 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 SDC4P31431 198 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 HARS2P49590 506 aaKnown RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 TBX4P57082 545 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CCZ1BP86790 482 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CCZ1P86791 482 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 ATP11AP98196 1134 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 NME3Q13232 169 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 SLC14A1Q13336 389 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CDO1Q16878 200 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 SLC25A52Q3SY17 297 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CCDC14Q49A88 953 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 MPPE1Q53F39 396 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 RAB6CQ53S08 254 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 FAM133BQ5BKY9 247 aaKnown RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 ADGRF1Q5T601 910 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 DCAF12L1Q5VU92 463 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 ARCQ7LC44 396 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 KIAA0907Q7Z7F0 614 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 NAXDQ8IW45 347 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 ZNF366Q8N895 744 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CYB5D2Q8WUJ1 264 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 ZNF830Q96NB3 372 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 SERPINB11Q96P15 392 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 RAB6CQ9H0N0 254 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 MRPL47Q9HD33 250 aaKnown RBP12.86□□□□□ -0.35
ACTN1-206ENST00000544964 ABCB8Q9NUT2 735 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 CTTNBP2NLQ9P2B4 639 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 STAP1Q9ULZ2 295 aa12.86□□□□□ -0.35
ACTN1-206ENST00000544964 GOLGA4Q13439 2230 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms