RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 U3KQA8 63 aa13.25□□□□□ -0.29
USP28-212ENST00000544750 PTPN13Q12923 2485 aa13.25□□□□□ -0.29
USP28-212ENST00000544750 TYW5A2RUC4 315 aaKnown RBP13.24□□□□□ -0.29
USP28-212ENST00000544750 OPA1O60313 960 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 ZNF202O95125 648 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 MPOP05164 745 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 CKMT1AP12532 417 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 CD19P15391 556 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 DGKAP23743 735 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 MAT2AP31153 395 aaKnown RBP13.24□□□□□ -0.29
USP28-212ENST00000544750 LSSP48449 732 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 RGS7P49802 495 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
USP28-212ENST00000544750 SKOR1P84550 965 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 LY6DQ14210 128 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 EDRF1Q3B7T1 1238 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 FMR1NBQ8N0W7 255 aaPredicted RBP13.24□□□□□ -0.29
USP28-212ENST00000544750 LSMEM2Q8N112 164 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
USP28-212ENST00000544750 SPAG5Q96R06 1193 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 CAAP1Q9H8G2 361 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 KIAA1257Q9ULG3 409 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 CA5BQ9Y2D0 317 aa13.24□□□□□ -0.29
USP28-212ENST00000544750 A0A1B0GVM2 712 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 PRAMEF26H0Y7S4 382 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 PIK3R2O00459 728 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 MOCS3O95396 460 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 C6P13671 934 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 RPL34P49207 117 aaKnown RBP13.23□□□□□ -0.29
USP28-212ENST00000544750 PLK1P53350 603 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 TAS2R38P59533 333 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 GABREP78334 506 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 DAB2P98082 770 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 CNTN1Q12860 1018 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 DPYDQ12882 1025 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 STAT4Q14765 748 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 BROXQ5VW32 411 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 FAM181AQ8N9Y4 354 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 KCNE4Q8WWG9 221 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 HSFY1Q96LI6 401 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 SERPINB11Q96P15 392 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 DPH1Q9BZG8 443 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 CLMPQ9H6B4 373 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 POLR1BQ9H9Y6 1135 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 PPM1HQ9ULR3 514 aa13.23□□□□□ -0.29
USP28-212ENST00000544750 DOCK4Q8N1I0 1966 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 A0A1W2PNU3 283 aaPredicted RBP13.22□□□□□ -0.29
USP28-212ENST00000544750 STX10O60499 249 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
USP28-212ENST00000544750 USP12O75317 370 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 PIAS2O75928 621 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 GP1BAP07359 652 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 PAEPP09466 180 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 YWHAEP62258 255 aaKnown RBP13.22□□□□□ -0.29
USP28-212ENST00000544750 VAC14Q08AM6 782 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 KCNMA1Q12791 1236 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 EIF4EBP2Q13542 120 aaPredicted RBP13.22□□□□□ -0.29
USP28-212ENST00000544750 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 CNGA2Q16280 664 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 SETMARQ53H47 684 aaPredicted RBP13.22□□□□□ -0.29
USP28-212ENST00000544750 RNF219Q5W0B1 726 aaPredicted RBP13.22□□□□□ -0.29
USP28-212ENST00000544750 LGI2Q8N0V4 545 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 ALG14Q96F25 216 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 APOLD1Q96LR9 279 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 DEPDC7Q96QD5 511 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 NAALADL1Q9UQQ1 740 aa13.22□□□□□ -0.29
USP28-212ENST00000544750 SCN8AQ9UQD0 1980 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 BOD1L1Q8NFC6 3051 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 PYCARD-AS1I3L0S3 204 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 RNF225M0QZC1 329 aaPredicted RBP13.21□□□□□ -0.29
USP28-212ENST00000544750 KLK10O43240 276 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 ATP9BO43861 1147 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 CSO75390 466 aaKnown RBP13.21□□□□□ -0.29
USP28-212ENST00000544750 FBXO21O94952 628 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 IGLV3-25P01717 112 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 THEGLP0DJG4 465 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 TACR2P21452 398 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
USP28-212ENST00000544750 SULT2A1Q06520 285 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 SYPL2Q5VXT5 272 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 RAP1GAP2Q684P5 730 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 BEND5Q7L4P6 421 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 CCDC117Q8IWD4 279 aaPredicted RBP13.21□□□□□ -0.29
USP28-212ENST00000544750 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 MED8Q96G25 268 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 PRR11Q96HE9 360 aaPredicted RBP13.21□□□□□ -0.29
USP28-212ENST00000544750 VCPIP1Q96JH7 1222 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 PRMT1Q99873 361 aaKnown RBP13.21□□□□□ -0.29
USP28-212ENST00000544750 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 TJP2Q9UDY2 1190 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 CEP83Q9Y592 693 aa13.21□□□□□ -0.29
USP28-212ENST00000544750 K7ENP7 123 aa13.2□□□□□ -0.3
USP28-212ENST00000544750 MCF2LO15068 1137 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms