RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 CACNA1EQ15878 2313 aa14.3□□□□□ -0.12
VAMP1-208ENST00000544432 A0A1B0GTW7 788 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 FAM170AA1A519 330 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 MEI4A8MW99 385 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 UPK3BL1B0FP48 263 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 UPK3BL2E5RIL1 263 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ARHGAP33O14559 1287 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 SEMA4FO95754 770 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 SERPINC1P01008 464 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 CFIP05156 583 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 RHOCP08134 193 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ACSL1P33121 698 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 RFC1P35251 1148 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 PRKCIP41743 596 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 STK19P49842 368 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 TPM4P67936 248 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 KRT83P78385 493 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ATP11AP98196 1134 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ELAVL3Q14576 367 aaKnown RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 CST6Q15828 149 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 C15orf59Q2T9L4 293 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 SKOR2Q2VWA4 1001 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 FIGNQ5HY92 759 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 PPM1JQ5JR12 505 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 C6orf118Q5T5N4 469 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 WDR59Q6PJI9 974 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 CACUL1Q86Y37 369 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 MMAAQ8IVH4 418 aaKnown RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 MCOLN2Q8IZK6 566 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 C1orf216Q8TAB5 229 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 C2orf49Q9BVC5 232 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ZDHHC5Q9C0B5 715 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ZYG11BQ9C0D3 744 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 TTYH3Q9C0H2 523 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 OSGEPQ9NPF4 335 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 TMPRSS4Q9NRS4 437 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ZNF212Q9UDV6 495 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 ADAMTS1Q9UHI8 967 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 VPS28Q9UK41 221 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 FZD4Q9ULV1 537 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 HS3ST2Q9Y278 367 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
VAMP1-208ENST00000544432 CXorf51AA0A1B0GTR3 108 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 ILVBLA1L0T0 632 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 LRRC53A6NM62 1247 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 ALOX15BO15296 676 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 ADH1BP00325 375 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 CSRP1P21291 193 aaKnown RBP14.28□□□□□ -0.12
VAMP1-208ENST00000544432 TNFAIP3P21580 790 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 GPD1P21695 349 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 C5AR1P21730 350 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 MAOBP27338 520 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 SLC8A1P32418 973 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 ZNF143P52747 638 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-208ENST00000544432 HDAC4P56524 1084 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 DLG2Q15700 870 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 PPP1R15BQ5SWA1 713 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 SH3PXD2AQ5TCZ1 1133 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 MANEALQ5VSG8 457 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 LRSAM1Q6UWE0 723 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 PHLDB2Q86SQ0 1253 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 FAM124AQ86V42 546 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 STK40Q8N2I9 435 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 DCAF4L2Q8NA75 395 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 NTAN1Q96AB6 310 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 PSMB7Q99436 277 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 C6orf106Q9H6K1 298 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-208ENST00000544432 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
VAMP1-208ENST00000544432 FBXL12Q9NXK8 326 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 MPP6Q9NZW5 540 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 OR12D3Q9UGF7 316 aa14.28□□□□□ -0.12
VAMP1-208ENST00000544432 C10orf142B7Z368 130 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 MCF2LO15068 1137 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 MID1O15344 667 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 BCAT2O15382 392 aaPredicted RBP14.27□□□□□ -0.13
VAMP1-208ENST00000544432 SRGAP2O75044 1071 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 GJB6O95452 261 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 GZMAP12544 262 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 GOT1P17174 413 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 OR1E1P30953 314 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 CLCN6P51797 869 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 ATXN3P54252 364 aaPredicted RBP14.27□□□□□ -0.13
VAMP1-208ENST00000544432 FANCCQ00597 558 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 SLC20A2Q08357 652 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 SCAPQ12770 1279 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 ASIC2Q16515 512 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 CDO1Q16878 200 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 RAB6CQ53S08 254 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 DSG4Q86SJ6 1040 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 LUZP1Q86V48 1076 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 FAM131CQ96AQ9 280 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 CNPY3Q9BT09 278 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 RAB6CQ9H0N0 254 aa14.27□□□□□ -0.13
VAMP1-208ENST00000544432 DNAAF2Q9NVR5 837 aaKnown RBP14.27□□□□□ -0.13
VAMP1-208ENST00000544432 EIF2B4Q9UI10 523 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms