RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MSANTD2Q6P1R3 559 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 BEND5Q7L4P6 421 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 NLRP14Q86W24 1093 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 SERAC1Q96JX3 654 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 FCRL3Q96P31 734 aaPredicted RBP13.99□□□□□ -0.17
HCFC2-202ENST00000544223 EBNA1BP2Q99848 306 aaKnown RBP13.99□□□□□ -0.17
HCFC2-202ENST00000544223 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 EPN3Q9H201 632 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 ZNF334Q9HCZ1 680 aaPredicted RBP13.99□□□□□ -0.17
HCFC2-202ENST00000544223 SPG21Q9NZD8 308 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 PSMC3IPQ9P2W1 217 aaPredicted RBP13.99□□□□□ -0.17
HCFC2-202ENST00000544223 LGALS13Q9UHV8 139 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 PSAT1Q9Y617 370 aa13.99□□□□□ -0.17
HCFC2-202ENST00000544223 WDR91A4D1P6 747 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 PMPCBO75439 489 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 URODP06132 367 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 CNPP09543 421 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 HSPA1AP0DMV8 641 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 HSPA1BP0DMV9 641 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ERVK-10P10266 1014 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 GLDCP23378 1020 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 PHBP35232 272 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 MAGEA6P43360 314 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 CHRNA4P43681 627 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TRIP4Q15650 581 aaPredicted RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ZKSCAN8Q15776 578 aaPredicted RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 PDZD4Q76G19 769 aaPredicted RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TMEM150AQ86TG1 271 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TADA2BQ86TJ2 420 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 RNF135Q8IUD6 432 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 LGI2Q8N0V4 545 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 RTL3Q8N8U3 475 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 KLHL23Q8NBE8 558 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 IPMKQ8NFU5 416 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 AZIN2Q96A70 460 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 THOC1Q96FV9 657 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TRIM62Q9BVG3 475 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 CHRAC1Q9NRG0 131 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 CLIC5Q9NZA1 410 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 PLXNA4Q9HCM2 1894 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 KIAA0355O15063 1070 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 CAPN15O75808 1086 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ARHGEF15O94989 841 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ZDHHC11BP0C7U3 371 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TPSB2P20231 275 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ALDH1A3P47895 512 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ITKQ08881 620 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 SLC10A7Q0GE19 358 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TPSAB1Q15661 275 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 DNAJB7Q7Z6W7 309 aaPredicted RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 DYDC1Q8WWB3 177 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 MFSD3Q96ES6 412 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 TEKT5Q96M29 485 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 SMG9Q9H0W8 520 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 CATSPERBQ9H7T0 1116 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 RBM22Q9NW64 420 aaKnown RBP eCLIP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 AFF4Q9UHB7 1163 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 IPO11Q9UI26 975 aaKnown RBP13.98□□□□□ -0.17
HCFC2-202ENST00000544223 MYLKQ15746 1914 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 ANAPC1Q9H1A4 1944 aa13.98□□□□□ -0.17
HCFC2-202ENST00000544223 VCANP13611 3396 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 HIDE1A8MVS5 230 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 LINC00271P0C7V0 271 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 MX2P20592 715 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 OR1E1P30953 314 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ATP5C1P36542 298 aaKnown RBP13.97□□□□□ -0.17
HCFC2-202ENST00000544223 FDFT1P37268 417 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 FAM133BQ5BKY9 247 aaKnown RBP13.97□□□□□ -0.17
HCFC2-202ENST00000544223 MROH9Q5TGP6 573 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 TAOK1Q7L7X3 1001 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 HS6ST3Q8IZP7 471 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 MCUQ8NE86 351 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 STAMBPL1Q96FJ0 436 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 BTN2A3PQ96KV6 586 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 CYTH2Q99418 400 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 UBE2OQ9C0C9 1292 aaKnown RBP13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ZYG11BQ9C0D3 744 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 GBA3Q9H227 469 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ALPK3Q96L96 1907 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 TGM5O43548 720 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 HOXC13P31276 330 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 TUFMP49411 452 aaKnown RBP13.97□□□□□ -0.17
HCFC2-202ENST00000544223 WDR4P57081 412 aaKnown RBP13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ERVFC1P60507 584 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 CYP4F8P98187 520 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 SLC1A5Q15758 541 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ADGRD1Q6QNK2 874 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 LRRC34Q8IZ02 419 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 C7orf61Q8IZ16 206 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ARHGAP18Q8N392 663 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 MZB1Q8WU39 189 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 NT5MQ9NPB1 228 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 IGSF9Q9P2J2 1179 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 SLC17A7Q9P2U7 560 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 USP34Q70CQ2 3546 aa13.97□□□□□ -0.17
HCFC2-202ENST00000544223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms