RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 PTRH1Q86Y79 214 aaKnown RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 TAF4BQ92750 862 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 MYOCQ99972 504 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 CALN1Q9BXU9 219 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 IRX2Q9BZI1 471 aaPredicted RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 CUEDC2Q9H467 287 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 NCKIPSDQ9NZQ3 722 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 PCDHGA7Q9Y5G6 932 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 DOCK9Q9BZ29 2069 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 A0A1W2PQ27 194 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 A0A1W2PQ64 194 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 SLC31A1O15431 190 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 POLR2DO15514 142 aaKnown RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 IRAK2O43187 625 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 MSI1O43347 362 aaKnown RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ZBED1O96006 694 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ASS1P00966 412 aaKnown RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 PRLRP16471 622 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 SLC6A4P31645 630 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 SLC11A2P49281 568 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 TKTL1P51854 596 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ECT2LQ008S8 904 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 SKIDA1Q1XH10 827 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ZACNQ401N2 412 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ZNF542PQ5EBM4 170 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 PITRM1Q5JRX3 1037 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 RNF219Q5W0B1 726 aaPredicted RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 HIST2H2BCQ6DN03 193 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 PM20D1Q6GTS8 502 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 C12orf56Q8IXR9 622 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 IQUBQ8NA54 791 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 OR13H1Q8NG92 308 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 ZNF564Q8TBZ8 553 aaPredicted RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 IFT43Q96FT9 208 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 C7orf25Q9BPX7 421 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 UBXN6Q9BZV1 441 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 LRRC4CQ9HCJ2 640 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 CEP83Q9Y592 693 aa12.55□□□□□ -0.4
ITM2C-209ENST00000543957 COL27A1Q8IZC6 1860 aaPredicted RBP12.55□□□□□ -0.4
ITM2C-209ENST00000543957 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 EME2A4GXA9 379 aaPredicted RBP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 PLD2O14939 933 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 MOCS3O95396 460 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 VAV1P15498 845 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CD58P19256 250 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CCR10P46092 362 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 HNRNPKP61978 463 aaKnown RBP eCLIP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CDH18Q13634 790 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CLCA4Q14CN2 919 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 FAM133BQ5BKY9 247 aaKnown RBP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 FSCBQ5H9T9 825 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 AGBL4Q5VU57 503 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 BHLHA9Q7RTU4 235 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CCDC117Q8IWD4 279 aaPredicted RBP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CARNMT1Q8N4J0 409 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 HJURPQ8NCD3 748 aaPredicted RBP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 EDEM1Q92611 657 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 DHX58Q96C10 678 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
ITM2C-209ENST00000543957 SPAG5Q96R06 1193 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 ULBP1Q9BZM6 244 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 DNAI2Q9GZS0 605 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 DNAJC28Q9NX36 388 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 ACSL6Q9UKU0 697 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 SARDHQ9UL12 918 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
ITM2C-209ENST00000543957 RP1P56715 2156 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 TYW5A2RUC4 315 aaKnown RBP12.53□□□□□ -0.4
ITM2C-209ENST00000543957 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
ITM2C-209ENST00000543957 ACSL4O60488 711 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 PFKFB1P16118 471 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 AKT2P31751 481 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 NNMTP40261 264 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 PDX1P52945 283 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 RPS24P62847 133 aaKnown RBP12.53□□□□□ -0.4
ITM2C-209ENST00000543957 CYP4F2P78329 520 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 DLG4P78352 724 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 CNTN1Q12860 1018 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 NR0B2Q15466 257 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 MANEAQ5SRI9 462 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
ITM2C-209ENST00000543957 DSG4Q86SJ6 1040 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms