RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PROSCO94903 275 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 EPHX1P07099 455 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 GABRG2P18507 467 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 WASP42768 502 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 CLCN6P51797 869 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 GEMIN4P57678 1058 aaKnown RBP18.34■□□□□ 0.53
TSFM-208ENST00000543727 GSDMDP57764 484 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 TPI1P60174 286 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 GNA12Q03113 381 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 ZBTB16Q05516 673 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 SLC20A2Q08357 652 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 DPYSL2Q16555 572 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 HNRNPA1L2Q32P51 320 aaKnown RBP18.34■□□□□ 0.53
TSFM-208ENST00000543727 KIAA1211LQ6NV74 962 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 CYP4V2Q6ZWL3 525 aaPredicted RBP18.34■□□□□ 0.53
TSFM-208ENST00000543727 PEBP4Q96S96 227 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 DHX35Q9H5Z1 703 aaKnown RBP18.34■□□□□ 0.53
TSFM-208ENST00000543727 ZWILCHQ9H900 591 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 POLR3BQ9NW08 1133 aaPredicted RBP18.34■□□□□ 0.53
TSFM-208ENST00000543727 PCSK1NQ9UHG2 260 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 RAB23Q9ULC3 237 aa18.34■□□□□ 0.53
TSFM-208ENST00000543727 A0A0A6YYK5 440 aaPredicted RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 EDDM13A0A1B0GTR0 161 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 WASH3PC4AMC7 463 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 ATP9BO43861 1147 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 CREB3O43889 395 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 RAMP2O60895 175 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 NDUFA10O95299 355 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 LMNAP02545 664 aaKnown RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 HADHBP55084 474 aaKnown RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 YBEYP58557 167 aaPredicted RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 SLC25A11Q02978 314 aaKnown RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 RETSATQ6NUM9 610 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 PYROXD2Q8N2H3 581 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 TXLNBQ8N3L3 684 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 OR52K2Q8NGK3 314 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 OR2T3Q8NH03 318 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 SLC35G2Q8TBE7 412 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 MRGPRX1Q96LB2 322 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 BAG1Q99933 345 aaPredicted RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 RCOR3Q9P2K3 495 aaPredicted RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 HPCAL4Q9UM19 191 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 RAD54BQ9Y620 910 aa18.33■□□□□ 0.52
TSFM-208ENST00000543727 EPN1Q9Y6I3 576 aaPredicted RBP18.33■□□□□ 0.52
TSFM-208ENST00000543727 ZSCAN5CA6NGD5 496 aaPredicted RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 H3BRJ5 948 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 EEF2KO00418 725 aaKnown RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 NDUFV2P19404 249 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 ARL4AP40617 200 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 MAGEA1P43355 309 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 PXNP49023 591 aaPredicted RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 SIM2Q14190 667 aaPredicted RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 PARP15Q460N3 678 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 SPDYCQ5MJ68 293 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 RFX8Q6ZV50 586 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 POLNQ7Z5Q5 900 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 UMODL1-AS1Q8N2C9 162 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 PGBD3Q8N328 593 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 SH2D3CQ8N5H7 860 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 ZC3H10Q96K80 434 aaKnown RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 PSMB7Q99436 277 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 ACE2Q9BYF1 805 aaPredicted RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 PRDM16Q9HAZ2 1276 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 VPS51Q9UID3 782 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 SCML1Q9UN30 329 aa18.32■□□□□ 0.52
TSFM-208ENST00000543727 TNRC6BQ9UPQ9 1833 aaKnown RBP18.32■□□□□ 0.52
TSFM-208ENST00000543727 THADAQ6YHU6 1953 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 A0A0D9SEW6 157 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 HRO43593 1189 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 RNASEH1O60930 286 aaKnown RBP18.31■□□□□ 0.52
TSFM-208ENST00000543727 KRT7P08729 469 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 IL1R2P27930 398 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 P2RY2P41231 377 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 SLC1A1P43005 524 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 CTSOP43234 321 aaPredicted RBP18.31■□□□□ 0.52
TSFM-208ENST00000543727 COPAP53621 1224 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 SFSWAPQ12872 951 aaKnown RBP18.31■□□□□ 0.52
TSFM-208ENST00000543727 ELAVL3Q14576 367 aaKnown RBP18.31■□□□□ 0.52
TSFM-208ENST00000543727 LAIR1Q6GTX8 287 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 SLC36A4Q6YBV0 504 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 CEP68Q76N32 757 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 TMPRSS6Q8IU80 811 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 LZTR1Q8N653 840 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 SUMF1Q8NBK3 374 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
TSFM-208ENST00000543727 LOXL4Q96JB6 756 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 BTBD6Q96KE9 485 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 CEP44Q9C0F1 390 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 ATP13A1Q9HD20 1204 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 OSGEPQ9NPF4 335 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.31■□□□□ 0.52
TSFM-208ENST00000543727 SMG5Q9UPR3 1016 aaKnown RBP18.31■□□□□ 0.52
TSFM-208ENST00000543727 PCDHA13Q9Y5I0 950 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 NUP205Q92621 2012 aa18.31■□□□□ 0.52
TSFM-208ENST00000543727 PRR23AA6NEV1 266 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 SOWAHDA6NJG2 315 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 ALOX15BO15296 676 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 DAPK3O43293 454 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 IGLV3-19P01714 112 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms